DRSC/TRiP Functional Genomics Resources

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Protein Alignment HUWE1 and Ube3c

DIOPT Version :10

Sequence 1:NP_001285288.1 Gene:HUWE1 / 32510 FlyBaseID:FBgn0030674 Length:5151 Species:Drosophila melanogaster
Sequence 2:NP_001414016.1 Gene:Ube3c / 362294 RGDID:1559986 Length:1083 Species:Rattus norvegicus


Alignment Length:429 Identity:135/429 - (31%)
Similarity:217/429 - (50%) Gaps:45/429 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly  4747 LRQSPTHLS-DGPFAVLVDHTRILDFDVKRKYFQ-----TELERLDEGIRREEHTVSVRRVTVFE 4805
            |...|..:| :...|:|.:...::.|:.:.|.||     .:.|...:|...:...|::||..::|
  Rat   670 LESPPLSVSEERQLAILTELPFVVPFEERVKIFQRLIYADKQEVQGDGPFLDGINVTIRRNYIYE 734

  Fly  4806 DSFRVLYRLGPE---EWKNRFYIVF-----EDEEGQDAGGLLREWYVIISREIFNPMYALFCVSP 4862
            |::.   :|.||   :.|.|..:..     .||.|.|.||:.||:...:.:..|||....| .:.
  Rat   735 DAYD---KLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLKSGFNPNQGFF-KTT 795

  Fly  4863 GDRVTYMINPSSH--ANPNHLSYFKFVGRVIAKAVHDNKLLECYFTRSFYKHILGK----QVKHT 4921
            .:.:.|. ||::.  ...:...::.|:||::.||:::|.|:|..|...|...:||.    .:.| 
  Rat   796 NEGLLYP-NPAAQMLVGDSFARHYYFLGRMLGKALYENMLVELPFAGFFLSKLLGTSADVDIHH- 858

  Fly  4922 DMESQDYEFYKGLDYL--MKNDISTLGYELTFSTEVQEFGVTQIRDLKPNGRDTAVTEENKFEYV 4984
             :.|.|.|.||.|.:|  .:.|:..||  |.|:....:.|..|:.:||..|:|..||..|:..|:
  Rat   859 -LASLDPEVYKNLLFLKSYEEDVEELG--LNFTVVNNDLGEAQVVELKFGGKDIPVTGANRIAYI 920

  Fly  4985 QLVCQLKMSGSIRQQLDAFLEGFYDIIPKHLISIFNEQELELLISG--LPDIDIEDLKANTEYH- 5046
            .||...:::..||....||.:|..:::....:.:|::||:::||||  :| :.:||||:.|.|. 
  Rat   921 HLVADYRLNKQIRPHCLAFRQGLANVVSLEWLRMFDQQEIQVLISGAQVP-VSLEDLKSFTNYSG 984

  Fly  5047 KYTSKSAQIQWFWRALRSFDQADRAKFLQFVTGTSKVPLQGFGSLEGMNGIQKFQIHRDDRSTDR 5111
            .|::....|:.|||.:..|...::.|.|:|||..|:.||.||..|     ...|.||......:|
  Rat   985 GYSADHPVIKIFWRVVEGFTDEEKRKLLKFVTSCSRPPLLGFKEL-----YPAFCIHNGGSDLER 1044

  Fly  5112 LPCAHTCFNQLDLPMYKSYDK--LRSCLLKAIHECSEGF 5148
            ||.|.||.|.|.||.:  ||:  |||.||.|| ||:.||
  Rat  1045 LPTASTCMNLLKLPEF--YDEALLRSKLLYAI-ECAAGF 1080

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HUWE1NP_001285288.1 DUF908 90..326 CDD:428721
DUF913 621..989 CDD:461803
UBA_like_SF 1467..1506 CDD:473871
WWE 1756..1828 CDD:128922
DUF5585 3288..3672 CDD:465521
UBM 3670..3700 CDD:464159
UBM 3719..3746 CDD:464159
HECTc 4796..5149 CDD:238033 124/374 (33%)
Ube3cNP_001414016.1 None
Blue background indicates that the domain is not in the aligned region.

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