DRSC/TRiP Functional Genomics Resources

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Protein Alignment HUWE1 and smurf1

DIOPT Version :10

Sequence 1:NP_001285288.1 Gene:HUWE1 / 32510 FlyBaseID:FBgn0030674 Length:5151 Species:Drosophila melanogaster
Sequence 2:NP_001001943.1 Gene:smurf1 / 321695 ZFINID:ZDB-GENE-040426-2744 Length:731 Species:Danio rerio


Alignment Length:485 Identity:181/485 - (37%)
Similarity:266/485 - (54%) Gaps:33/485 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly  4671 SAQEYSPFMDDVSSANTPSSASFDDEPRMQDASTNTPLVTNPSTSTAMSAHEAQLRQDRQKFLQF 4735
            |.:|..|........:|.|...:     ..|.:..|...|:|.....||.| :|:::..|     
Zfish   274 SCEELGPLPPGREIRSTVSGRIY-----FVDHNNRTTQFTDPRLHHIMSQH-SQVKESSQ----- 327

  Fly  4736 AEKHRTVLNQILRQSPTHLSDGPFAVLVDHTRILDFDVKRKYFQTELERLDEGIRREEHTVSVRR 4800
                     .:..|....:.:|...:.|.:.|.|...:|....:..|::...|..|    :.|.|
Zfish   328 ---------ALPVQMEVGMEEGDGELPVRYERDLVQKLKVLRHELSLQQPQAGHCR----IEVSR 379

  Fly  4801 VTVFEDSFRVLYRLGPEEWKNRFYIVFEDEEGQDAGGLLREWYVIISREIFNPMYALFCVSPGDR 4865
            ..:||:|:|.:.::.|::.|.|..:.|..|||.|.||:.|||..::..|:.||.|.||..|..:.
Zfish   380 EEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNI 444

  Fly  4866 VTYMINPSSHANPNHLSYFKFVGRVIAKAVHDNKLLECYFTRSFYKHILGKQVKHTDMESQDYEF 4930
            .|..|||.|..||:|||||.||||::..||.....:...||..|||.:|||.::..|:|:.|.|.
Zfish   445 YTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTLPFYKQLLGKPIQLCDLETVDPEL 509

  Fly  4931 YKGLDYLMKNDISTLGYELTFSTEVQEFGVTQIRDLKPNGRDTAVTEENKFEYVQLVCQLKMSGS 4995
            :|.|.::::|||::: .:.||..|...||.....:|||||::..||||||.|||:|....:....
Zfish   510 HKSLVWILENDITSV-LDHTFCVEHNAFGKFLQHELKPNGKNIPVTEENKKEYVRLYVNWRFMRG 573

  Fly  4996 IRQQLDAFLEGFYDIIPKHLISIFNEQELELLISGLPDIDIEDLKANTEYHKYTSKSAQIQWFWR 5060
            |..|..|..:||.::||:||:..|:.:||||:|.||..||:.|.||||......:.|..::|||:
Zfish   574 IEAQFLALQKGFNELIPQHLLKPFDNKELELIIGGLGKIDLNDWKANTRLKHCVADSNIVKWFWQ 638

  Fly  5061 ALRSFDQADRAKFLQFVTGTSKVPLQGFGSLEGMNGI---QKFQIHRDDRSTDRLPCAHTCFNQL 5122
            |:.|||:..|.:.||||||:::||||||.:|:|..|.   :.|.||..|.:||.||.||||||::
Zfish   639 AVESFDEERRGRLLQFVTGSTRVPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRI 703

  Fly  5123 DLPMYKSYDKLRSCLLKAIHE-CSEGFGFA 5151
            |:|.|:||:||...||.|:.| |    |||
Zfish   704 DIPPYESYEKLYEKLLTAVEETC----GFA 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HUWE1NP_001285288.1 DUF908 90..326 CDD:428721
DUF913 621..989 CDD:461803
UBA_like_SF 1467..1506 CDD:473871
WWE 1756..1828 CDD:128922
DUF5585 3288..3672 CDD:465521
UBM 3670..3700 CDD:464159
UBM 3719..3746 CDD:464159
HECTc 4796..5149 CDD:238033 155/356 (44%)
smurf1NP_001001943.1 C2_Smurf-like 14..138 CDD:176028
WW 234..266 CDD:197736
WW 280..312 CDD:197736 7/36 (19%)
HECTc 373..728 CDD:238033 156/363 (43%)
Blue background indicates that the domain is not in the aligned region.

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