DRSC/TRiP Functional Genomics Resources

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Protein Alignment HUWE1 and herc56.4

DIOPT Version :10

Sequence 1:NP_001285288.1 Gene:HUWE1 / 32510 FlyBaseID:FBgn0030674 Length:5151 Species:Drosophila melanogaster
Sequence 2:NP_001139103.2 Gene:herc56.4 / 100148091 ZFINID:ZDB-GENE-090311-7 Length:992 Species:Danio rerio


Alignment Length:439 Identity:103/439 - (23%)
Similarity:185/439 - (42%) Gaps:61/439 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  4724 QLRQDRQKFLQFAEKH-RTVLNQILRQSPTHLSDGPFAVLVDHTRILDFDVKRKYFQTELERLDE 4787
            |:.:|....::..|.: |||                 .:||......||..|::.|....|....
Zfish   593 QINEDFHDMVKLEEYYFRTV-----------------KILVKFPFASDFITKQRMFNLLQEECFR 640

  Fly  4788 GI------RREEHTVSVRRVTVFEDSFRVLYRLGPEEWKNRFYIVFEDEEGQDAGGLLREWYVII 4846
            .:      ....:.:.:.|.:|..|:.:.| |.....:.:...:.|..|:|.|..||..|::.:|
Zfish   641 NVPNLAMGNSFSNLLHINRESVLTDTLQYL-RQNTHSFMHPLQVAFIGEDGIDMRGLSAEFFSLI 704

  Fly  4847 SREIFNPMYALFCVSPGDRVTYMINPSSHA--NPNHL---SYFKFVGRVIAKAVHDNKLLECYFT 4906
            |:....          .|:....::.||..  ||:|.   ..|.::|.:...|:::...:...|.
Zfish   705 SKSFIE----------WDKKILEVHESSLVWFNPHHTRGNKNFYYLGVICGMALYNRHHINIDFP 759

  Fly  4907 RSFYKHILGKQVKHTDMESQDYEFYKGLDYLMKND---ISTLGYELTFSTEVQEFGVTQIRDLKP 4968
            .:.:|.:|.::....|:|.......:.|..|::.|   :..|.: |.|:.:.||        |.|
Zfish   760 LALFKKLLQQKPSLDDLEELSPVEARSLKNLLEEDEEEVVNLQH-LDFTCKGQE--------LVP 815

  Fly  4969 NGRDTAVTEENKFEYVQLVCQLKMSGSIRQQLDAFLEGFYDIIPKHLISIFNEQELELLISGLPD 5033
            ||....|.:.|:.:||.|...|:.:.|::.|.:.|..||....|....::|:.:||:.|:.|.|.
Zfish   816 NGSQIQVNKVNRQKYVDLYVDLEFNKSVKTQFEQFTRGFSKGCPLDAWTMFHPEELQELLHGSPQ 880

  Fly  5034 IDIEDLKANTEYHKYTSKSAQIQWFWRALRSFDQADRAKFLQFVTGTSKVPLQGFGSLEGMNGIQ 5098
            .:.::|:.:..|...::....|:.||.......:.::.|||.|:.||.:||..|...       :
Zfish   881 YNWKELQQSASYEGCSASDELIKNFWTVFFELSEENKKKFLMFLYGTERVPAGGLSK-------R 938

  Fly  5099 KFQIHRDD--RSTDRLPCAHTCFNQLDLPMYKSYDKLRSCLLKAIHECS 5145
            ..:|.:.|  ...|.||.|.|||.:|.||.|...:.|...|:.||:.|:
Zfish   939 ALKISQTDCPDPDDHLPEAQTCFERLVLPKYSDINTLHDKLIHAINSCA 987

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HUWE1NP_001285288.1 DUF908 90..326 CDD:428721
DUF913 621..989 CDD:461803
UBA_like_SF 1467..1506 CDD:473871
WWE 1756..1828 CDD:128922
DUF5585 3288..3672 CDD:465521
UBM 3670..3700 CDD:464159
UBM 3719..3746 CDD:464159
HECTc 4796..5149 CDD:238033 90/360 (25%)
herc56.4NP_001139103.2 None
Blue background indicates that the domain is not in the aligned region.

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