DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8117 and RPC11

DIOPT Version :10

Sequence 1:NP_573049.2 Gene:CG8117 / 32499 FlyBaseID:FBgn0030663 Length:162 Species:Drosophila melanogaster
Sequence 2:NP_010330.1 Gene:RPC11 / 851615 SGDID:S000002452 Length:110 Species:Saccharomyces cerevisiae


Alignment Length:73 Identity:27/73 - (36%)
Similarity:34/73 - (46%) Gaps:13/73 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 DMKQMRQKYVQDSINAAQMAKVQGTKTDQFKCERCDKRNCS-------QLHIRDGDEPIITFVIC 153
            |.|::.:|.|.|.:... ...|..|||   :|...|  .|.       ||.||..|||:.||..|
Yeast    42 DRKKLPRKEVDDVLGGG-WDNVDQTKT---QCPNYD--TCGGESAYFFQLQIRSADEPMTTFYKC 100

  Fly   154 DECGNRWK 161
            ..||:|||
Yeast   101 VNCGHRWK 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8117NP_573049.2 TFSII <4..161 CDD:273592 25/71 (35%)
RPC11NP_010330.1 RPB9 4..109 CDD:441202 27/73 (37%)
Zn-ribbon_RPC11 61..109 CDD:259794 22/53 (42%)

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