DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG8117 and RpI12

Sequence 1:NP_573049.2 Gene:CG8117 FlyBaseID:FBgn0030663 Length:162 Species:Drosophila melanogaster
Sequence 2:NP_524439.1 Gene:RpI12 FlyBaseID:FBgn0038903 Length:120 Species:Drosophila melanogaster

Alignment Length:33 Identity:12/34 (35%)
Similarity:17/34 (50%) Gaps:2/34 (6%)


  Fly   126 KCERC--DKRNCSQLHIRDGDEPIITFVICDEC 156
            ||.:|  ||.:.:.|.:|..||....|..|.:|
  Fly    80 KCPKCNHDKMSYATLQLRSADEGQTVFFTCLKC 112

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG8117NP_573049.2 TFIIS_M 3..109 CDD:284835
Zn-ribbon 118..161 CDD:295390 12/34 (35%)
RpI12NP_524439.1 RPB9 10..119 CDD:224510 12/34 (35%)
Zn-ribbon_RPA12 73..119 CDD:259792 12/34 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG1594
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
10.900

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