DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG8117 and Med26

Sequence 1:NP_573049.2 Gene:CG8117 FlyBaseID:FBgn0030663 Length:162 Species:Drosophila melanogaster
Sequence 2:NP_001100770.2 Gene:Med26 RGDID:1309524 Length:588 Species:Rattus norvegicus

Alignment Length:87 Identity:26/88 (30%)
Similarity:32/88 (36%) Gaps:24/88 (27%)


  Fly    75 LLGQITPEELSKMTPEEMASDDMKQMRQKYVQDSINAAQMAKVQGTKTDQFKCERC-----DKRN 134
            ||...||.:|..:| .|:..||:         |.|.|.|...|.|       ||..     |...
  Rat   519 LLPLPTPTDLPGLT-REVTQDDL---------DRIQAQQWPGVNG-------CEDTQGNWYDWTQ 566

  Fly   135 CSQL--HIRDGDEPIITFVICD 154
            |..|  |..||...|:.:|..|
  Rat   567 CISLDPHGDDGRLNILPYVCLD 588

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG8117NP_573049.2 TFIIS_M 3..109 CDD:284835 10/34 (29%)
Zn-ribbon 118..161 CDD:295390 12/45 (27%)
Med26NP_001100770.2 TFS2N 12..86 CDD:197766
Med26_M 178..405 CDD:292322
Med26_C 407..586 CDD:292321 25/84 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG1594
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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