DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alp11 and pho8

DIOPT Version :10

Sequence 1:NP_573047.1 Gene:Alp11 / 32496 FlyBaseID:FBgn0030661 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_596739.1 Gene:pho8 / 2539926 PomBaseID:SPBC14F5.13C Length:532 Species:Schizosaccharomyces pombe


Alignment Length:363 Identity:105/363 - (28%)
Similarity:165/363 - (45%) Gaps:54/363 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 FLLHALIPILALSVPMVEQVQPADELLSSHWLRQAQSQLRERLARTKDSIADVRQAKNVVMLLGD 76
            ::.|.::.||.||..:...      ..|||                 .|.....:.|.|:|::.|
pombe    27 WIKHGILLILVLSTVIFFY------FFSSH-----------------KSKGTNEKPKFVIMMVSD 68

  Fly    77 GLSITTLTAARIL---KGQRRGGRGEDAQLAVEQFPFSGLSKTYCIDEQTPDSACTATAYFGGVK 138
            |:...:|:..|..   ...:.|.|     |.:::. ..|.|:|........|||..|||:....|
pombe    69 GMGPGSLSMTRSFVETLNDKEGYR-----LPLDEH-LIGSSRTRSSSSLITDSAAGATAFSCANK 127

  Fly   139 THSGTVGQSGSGERVDSVLQWAQRAGKATGVVTTTRLTDASPAGAYAHVSRRGEELEIARQLVEE 203
            |::|.||...:.:...::|:.|:.||..||:|.|:|:|||:||...||.:.|..:..||...|..
pombe   128 TYNGAVGVLDNEKPCGTILEAAKEAGYLTGIVVTSRVTDATPASFSAHAANRFMQDLIAEYQVGM 192

  Fly   204 EP-GRNLNVILGGGLGKFADE------RRDGKDLLAQWRESNPNGCFSRSLKELRNCTD------ 255
            .| ||:::::.||||..|..:      |.|..|||...|:       ....:.|.|.||      
pombe   193 GPLGRSVDLLFGGGLCSFLPKSTYRSCRSDNLDLLKYARK-------KEGFQILLNRTDFDELSN 250

  Fly   256 ATGTLLGIFSDSHMSYHLAASKEL-PRLCDMAAAAIEKLERKSQED-GNGYFVFIEGGRIDHGHH 318
            |...|||:|||.|:||.:....|: |:|.:|...|::.|...:.|| ..|:|:.|||.|||...|
pombe   251 AQLPLLGLFSDYHLSYDIDYQPEVQPKLSEMVETALDVLLNATNEDTSKGFFLLIEGSRIDMASH 315

  Fly   319 ETRVGYALDEMVEFDAAVETVIQMTDPRDTLVVVTADH 356
            .......:.|::|::.|.|......:.....::.|:||
pombe   316 NNDPIAHVYEVMEYNRAFEIASAFVEKNGGSLISTSDH 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp11NP_573047.1 ALP_like 68..467 CDD:474031 96/307 (31%)
pho8NP_596739.1 PhoA 29..486 CDD:441391 105/361 (29%)

Return to query results.
Submit another query.