DRSC/TRiP Functional Genomics Resources

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Protein Alignment cerv and Nsmce2

DIOPT Version :10

Sequence 1:NP_573043.1 Gene:cerv / 32492 FlyBaseID:FBgn0030657 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_001361697.1 Gene:Nsmce2 / 68501 MGIID:1915751 Length:273 Species:Mus musculus


Alignment Length:277 Identity:59/277 - (21%)
Similarity:103/277 - (37%) Gaps:84/277 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VDSALTTLLENQKFFKEMAEVVSDFSDGREIQKLLDQNVDLAENLIRMKSKHQLLSKAM------ 65
            ::|||::|...|.......:.||..:            :||.|....:.|::. :.|||      
Mouse    20 IESALSSLKNFQSCISSGMDTVSSVA------------LDLVETQTEVSSEYS-MDKAMVEFAKM 71

  Fly    66 -----KHAKNSSNTIEKFEEVWKERSEAVEQKRIDV---------KNS-AEFKNFMKAAA----- 110
                 .:.|...:||...:|   ||.|.|...::.|         ||| |:||...|...     
Mouse    72 DRELSHYVKAVQSTINHVKE---ERPEKVPDLKLLVEKKFLALQDKNSDADFKENEKFVQFKQQL 133

  Fly   111 --------------------PQAGAETNGQANSAAH-----------DEDLIMEATGGEVFSLYD 144
                                |...:...|......|           |||:|:..:......   
Mouse   134 RELKKQLVKPKEDGRHSEFDPNKDSSRAGNKRDGIHADRENDLTEGVDEDMIVTQSQTNFIC--- 195

  Fly   145 PWSKALIKNPVRNKKCGHIYDRDSVMLIITDNIGIR----CPVLGCPNRSYIHPAHLVKDSNLQQ 205
            |.::..:|.||:||.|||.|:.::::.:|......:    ||.:|| :.:.:..:.|:.|..|::
Mouse   196 PITQLEMKKPVKNKMCGHTYEEEAIVRMIESKHKRKKKACCPKIGC-SHTDMRMSDLIPDEALRR 259

  Fly   206 KLQERMSDAIEKETSSE 222
            .::   |...:|:..||
Mouse   260 AIE---SHNKKKKRHSE 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cervNP_573043.1 SPL-RING_NSE2 145..209 CDD:438313 18/67 (27%)
Nsmce2NP_001361697.1 SPL-RING_NSE2 193..262 CDD:438313 18/72 (25%)

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