DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG42299 and nse2

Sequence 1:NP_727866.2 Gene:CG42299 FlyBaseID:FBgn0259195 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001343015.1 Gene:nse2 PomBaseID:SPAC16A10.06c Length:250 Species:Schizosaccharomyces pombe

Alignment Length:176 Identity:38/177 (21%)
Similarity:69/177 (39%) Gaps:42/177 (24%)


  Fly     9 HQKLFREMAEVVSNSSDDGEKLLTKNSSNTIEKSEEVCKERPEAVEQMRIDVNNSLED------- 66
            :.::|:|:.:.....||.|:   .......||..:.:..|:           |....|       
pombe   104 YTQIFKELIQEYEEKSDYGK---YGTQGEYIEFKKTIWHEQ-----------NTDGSDFPSMKTF 154

  Fly    67 TNYMNAVESEAQKNIAGLDEDLIMEDFGVEVVPFHD--PWSKLLIKHPVRNKRCGHIYDRETVLM 129
            .|.||..|.||       ||.::..      ..|.:  |.:...|.||:.:..|.|.|:::.:|.
pombe   155 FNVMNTEEQEA-------DEVMVYS------ATFDNRCPLTLQPIVHPILSTACNHFYEKDAILS 206

  Fly   130 IIKDNIGILCPVRDCPNLSDIKLEHLVKDPDVEQELQKRKSDKIKN 175
            ::  |...:|||..|    :.:|:..:...|...|.:.|::.:|.|
pombe   207 LL--NPTCVCPVVGC----EARLQRSLLKEDEILERRLRRAQEISN 246

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG42299NP_727866.2 RING 86..144 CDD:302633 14/60 (23%)
nse2NP_001343015.1 RING_Ubox 4..250 CDD:327409 38/177 (21%)
SPL-RING finger 179..219 CDD:319565 12/42 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 FOG0002478
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR21330
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 1 0.960
33.060

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