DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15027 and Tma16

DIOPT Version :10

Sequence 1:NP_572999.1 Gene:CG15027 / 32440 FlyBaseID:FBgn0030611 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001162573.1 Gene:Tma16 / 290686 RGDID:1305222 Length:221 Species:Rattus norvegicus


Alignment Length:201 Identity:56/201 - (27%)
Similarity:96/201 - (47%) Gaps:32/201 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 EKCKHPNSRKTKALGKKARRQNNKHKVRLGHAIKSNITGEKLSWFLGQIDEGRTEPLRPQELEDL 73
            :|..||.|||...:.:::.:|:.|.:::...|::.|:.|:||.||...:|..::...:....| |
  Rat    14 KKVIHPYSRKAAQITRESHKQDKKERLKTERALRLNLIGDKLQWFHSHLDTKKSRYSKKDACE-L 77

  Fly    74 IELYFTRFDEELEQINLKQSIGKHRANQHAARKDVITMTLEKERNEFRTGGLELMNLCDPLKLKM 138
            ||.|..||..|||||.|..||...:..:|.:|:.||..|:|:||.::...|.|:.::.|...|..
  Rat    78 IERYLDRFSSELEQIELHNSIKDRQGRRHHSREAVIKQTMERERQQYEGYGFEIPDIVDSNALNT 142

  Fly   139 LRDWDGSALSVQHLKL------DLV-----SYNMLQ--------------------RLKEQSKKK 172
            .|:||.....:.::|:      |.|     ..|:|.                    :|:..|:..
  Rat   143 FREWDFDLKKLPNIKMRKLCANDAVPKKRKQKNILNIEKDLGELDLTGETGDATDGKLEPASESS 207

  Fly   173 ETSEQM 178
            :|.|:|
  Rat   208 DTDEEM 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15027NP_572999.1 Tma16 9..158 CDD:463236 49/159 (31%)
Tma16NP_001162573.1 Tma16 13..163 CDD:463236 47/149 (32%)

Return to query results.
Submit another query.