DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9519 and chdh-1

DIOPT Version :10

Sequence 1:NP_572978.1 Gene:CG9519 / 32415 FlyBaseID:FBgn0030589 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_495846.1 Gene:chdh-1 / 174390 WormBaseID:WBGene00007917 Length:599 Species:Caenorhabditis elegans


Alignment Length:620 Identity:201/620 - (32%)
Similarity:295/620 - (47%) Gaps:112/620 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 ENLDEG----QVITTKYDFIVVGAGTAGCALAARLSENPRWRVLLLEAGGPENYAMDIPI----- 105
            :::.||    .:...|...|:||||:|||.||.||:|:|..||||:|| ||.::..|..|     
 Worm    22 DSMKEGTFSADIAENKPTHIIVGAGSAGCVLANRLTEDPSNRVLLIEA-GPVDHKWDWRIHMPAA 85

  Fly   106 VAHLLQLGEINWKYKTEPSNSYCLAMNNNRCNWPRGKVMGGSSVLNYMMYTRGNRRDYDRWARLG 170
            :.:.|.....||.|.|....:    :.|....||||:|.||||.||.|.|.||:..||:||.:.|
 Worm    86 LMYNLCSDTYNWHYHTTAQKN----LGNRVFYWPRGRVWGGSSTLNAMCYVRGHAYDYNRWEKEG 146

  Fly   171 NPGWSYEEVLPYFKK---YEGSVVPDADENLVGRNGPVKVSYSETRTRIADAFVGATQDAGLPRG 232
            ..||:|...||||||   |..:..|  ::...|.|||:.|...:....:..|::...::.  |.|
 Worm   147 ASGWNYANCLPYFKKAETYSDATGP--NDPYRGNNGPLYVKKGDAENPLHKAWLNVGKEH--PLG 207

  Fly   233 ---DYNGDKQIRVSYLQANIYNETRWSSNRAYLYPIKGKRRNLHVKKNALVTKILIDPQTKSAFG 294
               |.||:||..:|.:...|:|..|||:::||::||: .|.||........|::|.|  |..|.|
 Worm   208 WTNDMNGEKQEGISTMDMTIHNGERWSASKAYVHPIR-NRPNLITSSGITCTRVLFD--TNKAIG 269

  Fly   295 I-------IVKMDG----KMQKILARKEVILSAGAINTPQLLMLSGVGPAKHLREMGIKPLADL- 347
            |       .|..|.    ..:||..:.:|||:.|||||||||||||||||.|||...|..:|:| 
 Worm   270 IEFIRKLNFVGTDSIDSYSREKIYCQGDVILAGGAINTPQLLMLSGVGPADHLRSHEIPIVANLP 334

  Fly   348 AVGYNLQDHIAPAISFLCNVSSLQTSEMFRSEAMSDFLKGRGVLRIPGGVEAISFYALDDARNPD 412
            .||.|||||:                |::..:.               ..:.::.|      |..
 Worm   335 GVGQNLQDHL----------------EIYVQQE---------------STQPVTLY------NKS 362

  Fly   413 AWA-DMELFVVGGGLQTNLALRLALGIQSNIYETMFGELE-----------------------RQ 453
            :|. ...:..:|....||   |..||..|::....|...:                       ..
 Worm   363 SWKFPHNMIKIGLEWFTN---RTGLGASSHLETGGFARSDDTVTHPDIQFHFLPSTVHDDGRTNG 424

  Fly   454 SANGFLIFPMILRAKSRGRIKLKSRNPEEHPRIYANYFANPYDMNITVRGIEQAVSLLDMPAFKA 518
            :.:|:.:....:|::|:|.|.|::::|...|.|..||.....|.....:.|..:..|....||..
 Worm   425 TCHGYQVHVGPMRSQSKGYIMLQAKDPRRAPIINPNYMEEDSDWREFRKCIRVSRELFASKAFDE 489

  Fly   519 I-GAHLLEKRIPNCAKYKWKSSAYWACYARHFTFTIYHYSGTAKMGPRSDPSAVVDAR-LRVHGI 581
            . |..|...  |:|     :|.|....:.:....:.||.|.|.|||..:|..|||:.. :.|:|.
 Worm   490 FRGKELAPG--PDC-----QSDADIDRFVKEKAASAYHPSCTCKMGSENDKMAVVNPETMGVYGT 547

  Fly   582 DKLRVVDASIMPYLISGHPNGPVYLIAEKAADMIK 616
            :.|:|||||:||.::||:.|.||.::||:|||:||
 Worm   548 ENLKVVDASVMPSIVSGNLNAPVIMMAERAADLIK 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9519NP_572978.1 BetA 59..619 CDD:441878 199/607 (33%)
chdh-1NP_495846.1 Rossmann-fold NAD(P)(+)-binding proteins 41..599 CDD:473865 198/601 (33%)

Return to query results.
Submit another query.