DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG5347 and AT1G75340

Sequence 1:NP_572970.1 Gene:CG5347 FlyBaseID:FBgn0030578 Length:285 Species:Drosophila melanogaster
Sequence 2:NP_565108.2 Gene:AT1G75340 AraportID:AT1G75340 Length:435 Species:Arabidopsis thaliana

Alignment Length:198 Identity:45/199 (23%)
Similarity:70/199 (35%) Gaps:61/199 (31%)


  Fly     9 ICRFHLLGICRFGDLCRFSH-DETTPND-------NQSPQISEIADEVVENEQVVASTSSYSRQM 65
            :||....|.||:|:.|||.| .:..||:       ||..|..       :.:|..::...:..|.
plant     5 LCRNFQRGSCRYGENCRFLHPQQAKPNNPFGFGTQNQQQQQQ-------QQQQNSSNPFGFGVQS 62

  Fly    66 TWANAPEFVPRYKANSADFQATEGVQDICPYGGSCIWGS------------KCSYPLHMEICK-- 116
            ..::.|.          .||.|.......|.||.....:            ||:.|   ..||  
plant    63 GGSSRPN----------QFQNTWSRTASTPTGGGAAASTQQTGKQTQPADHKCTDP---AACKRV 114

  Fly   117 MCDLYCLHPMDQNQRRAHNRECLEQH-----EQAMELSF----AIARSKDKMCGICFDTVVEKKG 172
            |.|.:      :|:|......|....     :...::|:    |:|..:.|. ||...::||   
plant   115 MQDDF------KNERPMWKLTCYGHWKYFPCDVTGDISYEELRAVAYEEAKR-GIPLQSIVE--- 169

  Fly   173 RER 175
            |||
plant   170 RER 172

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG5347NP_572970.1 ZnF_C3H1 4..30 CDD:214632 10/22 (45%)
PHA03096 <80..239 CDD:222981 27/120 (23%)
RING 159..213 CDD:238093 7/18 (39%)
AT1G75340NP_565108.2 ZnF_C3H1 2..25 CDD:214632 10/20 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR11224
Phylome 00.000 Not matched by this tool.
11.100

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