DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5347 and Rnf141

DIOPT Version :10

Sequence 1:NP_572970.1 Gene:CG5347 / 32403 FlyBaseID:FBgn0030578 Length:285 Species:Drosophila melanogaster
Sequence 2:NP_080275.2 Gene:Rnf141 / 67150 MGIID:1914400 Length:230 Species:Mus musculus


Alignment Length:79 Identity:23/79 - (29%)
Similarity:30/79 - (37%) Gaps:20/79 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 DKMCGICFDTVVEKKGRERRFGILSKCKHIFCLTCIRTWRQAHQFEATVTRGCPECRVFSEFVCP 221
            ::.|.||.|         .|..::..|.|.||..||..|...|       |.||.||:  :....
Mouse   152 EEECCICMD---------GRADLILPCAHSFCQKCIDKWSDRH-------RNCPICRL--QMTGA 198

  Fly   222 SAYWV--DTKEEKD 233
            :..||  |...|.|
Mouse   199 NESWVVSDAPTEDD 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5347NP_572970.1 zf-CCCH_4 8..29 CDD:465626
PHA03096 <80..239 CDD:222981 23/79 (29%)
RING-HC_MKRN 158..213 CDD:438184 16/54 (30%)
Rnf141NP_080275.2 RING-HC_RNF141 153..192 CDD:438207 16/54 (30%)
Blue background indicates that the domain is not in the aligned region.

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