DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5347 and rnf141

DIOPT Version :10

Sequence 1:NP_572970.1 Gene:CG5347 / 32403 FlyBaseID:FBgn0030578 Length:285 Species:Drosophila melanogaster
Sequence 2:NP_001007291.2 Gene:rnf141 / 414846 ZFINID:ZDB-GENE-040625-71 Length:222 Species:Danio rerio


Alignment Length:97 Identity:25/97 - (25%)
Similarity:38/97 - (39%) Gaps:24/97 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 EQAMELSFAIARSK----DKMCGICFDTVVEKKGRERRFGILSKCKHIFCLTCIRTWRQAHQFEA 203
            |...:.|..:.|.|    ::.|.||.|...:         ::..|.|.||..||..|       :
Zfish   126 EDTCQASMWMGRVKQLTDEEECCICMDGKAD---------LILPCAHSFCQKCIDKW-------S 174

  Fly   204 TVTRGCPECRVFSEFVCPSAYWV--DTKEEKD 233
            ..:|.||.||:  :....:..||  |...|:|
Zfish   175 GQSRNCPVCRI--QVTAANESWVMSDAPTEED 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5347NP_572970.1 zf-CCCH_4 8..29 CDD:465626
PHA03096 <80..239 CDD:222981 25/97 (26%)
RING-HC_MKRN 158..213 CDD:438184 14/54 (26%)
rnf141NP_001007291.2 RING-HC_RNF141 145..184 CDD:438207 14/54 (26%)
Blue background indicates that the domain is not in the aligned region.

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