DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13404 and Plgrkt

DIOPT Version :10

Sequence 1:NP_572954.2 Gene:CG13404 / 32382 FlyBaseID:FBgn0030559 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_001099817.1 Gene:Plgrkt / 293888 RGDID:1306839 Length:147 Species:Rattus norvegicus


Alignment Length:114 Identity:36/114 - (31%)
Similarity:66/114 - (57%) Gaps:0/114 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LKMERWIQMHYQIKQREQALAIAHHRELFYWLSGFYLSAVYGCASYYQRVRRVSALAPLLPLTFV 93
            |::||.:.|..::::|:.|:.||..||...:...|:..|....|:...:.::.:.|.|::||:|:
  Rat    26 LQLERQLIMQNEMRERQMAMQIAWSREFLKYFGTFFGIATISLAAGAIKRKKPAFLIPIVPLSFI 90

  Fly    94 VGYYTDWAYGSKMHRIQAEANMIMEHEQELLHWPGGLPTVAGIDEARVE 142
            ..|..|..||:.:.|:::||..|:|.|:..|..|.||.|...:::||.|
  Rat    91 FTYQYDLGYGTLLQRMKSEAEDILETEKTKLELPKGLITFESLEKARRE 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13404NP_572954.2 DUF2368 12..137 CDD:431104 33/107 (31%)
PlgrktNP_001099817.1 DUF2368 1..134 CDD:431104 33/107 (31%)

Return to query results.
Submit another query.