DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tat and ybdL

DIOPT Version :10

Sequence 1:NP_572953.1 Gene:Tat / 32381 FlyBaseID:FBgn0030558 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_415133.1 Gene:ybdL / 945211 ECOCYCID:G6329 Length:386 Species:Escherichia coli


Alignment Length:383 Identity:91/383 - (23%)
Similarity:148/383 - (38%) Gaps:75/383 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 PMIPLS----IGDPTTFGNLKAADETMKAV-------------------LHSLESGKYNGYASTQ 151
            |:||.|    :| .|.|..:.|..:..:|:                   .|.:..|. |.||...
E. coli     5 PLIPQSKLPQLG-TTIFTQMSALAQQHQAINLSQGFPDFDGPRYLQERLAHHVAQGA-NQYAPMT 67

  Fly   152 GHEIARKAVAKYSAH---QRPDGEIDANEVVLCSGCSSALEYCILALADRGQNVLVPRPGFCLY- 212
            |.:..|:|:|:.:..   .:||.:.|   :.:.:|.:.||...|.||...|..|:...|.:..| 
E. coli    68 GVQALREAIAQKTERLYGYQPDADSD---ITVTAGATEALYAAITALVRNGDEVICFDPSYDSYA 129

  Fly   213 --YTLAQGLDIEVRYYDLLPDQQWRADLVQLESLIDENTAALLINNPSNPCGSVFDEKHLRELIA 275
              ..|:.|:   |:...|.| ..:|.|..:..:|:.|.|..:::|.|.||..:|:.:.....|..
E. coli   130 PAIALSGGI---VKRMALQP-PHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQ 190

  Fly   276 ICERHYLPIIADEIYEHFVFPGSKH---LAVSSLTTEVPVLSCGGLTKRFLVPGWRMGWII---- 333
            ....|.:.:|:||:|||..|....|   ||...|......:|..|  |.:.:.||::|:.:    
E. coli   191 AIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFG--KTYHMTGWKVGYCVAPAP 253

  Fly   334 -------VHDRKNRLRDAIVGLKNMCGRILGSNTIIQGALPDILTKTPQSYFDGVIDVLHSNAML 391
                   ||....                ...||..|.||.|:|...|:.|. .:.|.......:
E. coli   254 ISAEIRKVHQYLT----------------FSVNTPAQLALADMLRAEPEHYL-ALPDFYRQKRDI 301

  Fly   392 AYKMLKQVRGLDPVMPNGAMYMMIGVSIERFPEFKDDTHFVQEMVNEQSVFCLPGSCF 449
            ....|.:.| |:.:...|..::::..|.   ....||..|.|.:..|..|..:|.|.|
E. coli   302 LVNALNESR-LEILPCEGTYFLLVDYSA---VSTLDDVEFCQWLTQEHGVAAIPLSVF 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TatNP_572953.1 tyr_amTase_E 79..481 CDD:273529 91/383 (24%)
ybdLNP_415133.1 PRK09082 1..386 CDD:181642 91/383 (24%)

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