DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Clic and GDAP1L1

DIOPT Version :10

Sequence 1:NP_572928.1 Gene:Clic / 32349 FlyBaseID:FBgn0030529 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001243666.1 Gene:GDAP1L1 / 78997 HGNCID:4213 Length:386 Species:Homo sapiens


Alignment Length:150 Identity:31/150 - (20%)
Similarity:54/150 - (36%) Gaps:29/150 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 PPDFRTNFEATHPPILIDNGLAILENEKIERHIMKNIPGGYNLFVQDKEVATLIENLYV----KL 132
            |.|..|:....||.:..|:.:......:|.||:..   ...:|...|.|....:...|:    ||
Human   172 PMDAYTHGCILHPELTTDSMIPKYATAEIRRHLAN---ATTDLMKLDHEEEPQLSEPYLSKQKKL 233

  Fly   133 KLMLVKKDEAKN-NALLSHLRKINDHLSAR-NTRFLTGDTMCCFDCEL----------------- 178
            ...:::.|:... ..:|..|..:.|.:.|. ..|.|..:..   .|||                 
Human   234 MAKILEHDDVSYLKKILGELAMVLDQIEAELEKRKLENEGQ---KCELWLCGCAFTLADVLLGAT 295

  Fly   179 MPRLQHIRVAGKYFVDFEIP 198
            :.||:.:.::.||:.|...|
Human   296 LHRLKFLGLSKKYWEDGSRP 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClicNP_572928.1 GST_N_CLIC 18..112 CDD:239359 9/39 (23%)
GST_C_CLIC 118..232 CDD:198307 20/103 (19%)
GDAP1L1NP_001243666.1 GST_N_GDAP1 47..119 CDD:239350
GST_C_GDAP1L1 220..330 CDD:198335 18/98 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.