DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clic and clic5a

DIOPT Version :10

Sequence 1:NP_572928.1 Gene:Clic / 32349 FlyBaseID:FBgn0030529 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001007386.1 Gene:clic5a / 492513 ZFINID:ZDB-GENE-041114-84 Length:246 Species:Danio rerio


Alignment Length:230 Identity:74/230 - (32%)
Similarity:117/230 - (50%) Gaps:29/230 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 PEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQKPPPDFRTNFEATHPP 85
            |:|||.:||.: ||...|.|.|.|..||.|:    ||.:...|||||:::.|.|.......|.||
Zfish    10 PDIELFVKAGS-DGESIGNCPFSQRLFMILW----LKGVVFNVTTVDLKRKPADLHNLAPGTPPP 69

  Fly    86 ILIDNGLAILENEKIERHIMKNI-PGGY-NLFVQDKEVATLIENLYVKLKLMLVKKDEAKNNA-- 146
            .|..||....:..|||..:.:.: |..| .|..::||..|...:::.|.. ..:|..:.:.||  
Zfish    70 FLTFNGEVRTDVNKIEEFLEEMLAPPKYPKLAAKNKESNTAGNDIFAKFS-AYIKNTKPEANASL 133

  Fly   147 ---LLSHLRKINDHLS----------------ARNTRFLTGDTMCCFDCELMPRLQHIRVAGKYF 192
               ||..|:|::..|:                :.|.::|.|:.:...||.|:|:|..::|..|.:
Zfish   134 EKGLLKVLKKLDSFLNSPLPDEIDAESTGEEKSSNRKYLDGNELTLADCNLLPKLHVVKVVSKKY 198

  Fly   193 VDFEIPTHLTALWRYMYHMYQLDAFTQSCPADQDI 227
            .:||||:.|:.:|||:.:.|..|.||.:|.||::|
Zfish   199 RNFEIPSDLSGVWRYLQNAYSRDEFTNTCAADREI 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClicNP_572928.1 GST_N_CLIC 18..112 CDD:239359 34/91 (37%)
GST_C_CLIC 118..232 CDD:198307 38/131 (29%)
clic5aNP_001007386.1 O-ClC 10..244 CDD:129941 74/230 (32%)

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