DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clic and Clic6

DIOPT Version :10

Sequence 1:NP_572928.1 Gene:Clic / 32349 FlyBaseID:FBgn0030529 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_788267.2 Gene:Clic6 / 304081 RGDID:727938 Length:613 Species:Rattus norvegicus


Alignment Length:234 Identity:77/234 - (32%)
Similarity:117/234 - (50%) Gaps:31/234 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 EIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQKPPPDFRTNFEATHPPI 86
            :|.|.:||.: ||...|.|.|.|..||.|:    ||.:...|||||:::.|.|.:.....|:||.
  Rat   379 DITLFVKAGS-DGESIGNCPFSQRLFMILW----LKGVIFNVTTVDLKRKPADLQNLAPGTNPPF 438

  Fly    87 LIDNGLAILENEKIERHI-MKNIPGGY-NLFVQDKEVATLIENLYVKLKLML--VKKDE----AK 143
            :..:|....:..|||..: .|.:|..| .|..|..|..:...:::.|....:  .|||.    .|
  Rat   439 MTFDGEVKTDVNKIEEFLEEKLVPPRYPKLGTQHPESNSAGNDVFAKFSAFIKNTKKDANDIYEK 503

  Fly   144 NNALLSHLRKIN--------DHLSARNT--------RFLTGDTMCCFDCELMPRLQHIRVAGKYF 192
            |  ||..|:|::        |.:.|.:|        :||.||.:...||.|:|:|..|::..|.:
  Rat   504 N--LLRALKKLDSYLNSPLPDEIDAYSTEDVTVSQRKFLDGDELTLADCNLLPKLHIIKIVAKKY 566

  Fly   193 VDFEIPTHLTALWRYMYHMYQLDAFTQSCPADQDIINHY 231
            ..||.|:.:|.:|||:.:.|..|.||.:|||||:|.:.|
  Rat   567 RGFEFPSEMTGIWRYLNNAYARDEFTNTCPADQEIEHAY 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClicNP_572928.1 GST_N_CLIC 18..112 CDD:239359 31/90 (34%)
GST_C_CLIC 118..232 CDD:198307 43/136 (32%)
Clic6NP_788267.2 2A1904 <51..318 CDD:273344
O-ClC 380..613 CDD:129941 77/233 (33%)
G-site. /evidence=ECO:0000250|UniProtKB:Q9Y696 396..399 1/2 (50%)
Blue background indicates that the domain is not in the aligned region.

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