DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsB and AT3G43960

DIOPT Version :10

Sequence 1:NP_572920.1 Gene:CtsB / 32341 FlyBaseID:FBgn0030521 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_566867.1 Gene:AT3G43960 / 823513 AraportID:AT3G43960 Length:376 Species:Arabidopsis thaliana


Alignment Length:249 Identity:74/249 - (29%)
Similarity:110/249 - (44%) Gaps:57/249 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 DELPEEFDSRKQWPNCPTIGEIRDQGSCGSCWAF---GAVEAMSDRVCIHSGGKVNFHFSADDLV 146
            |.||:|.|.|::....|   .::.||.|||||||   ||||.::.   |.:|..|:  .|..:|:
plant   125 DVLPDEVDWRERGAVVP---RVKRQGECGSCWAFAATGAVEGINQ---ITTGELVS--LSEQELI 181

  Fly   147 SCCH-TCGFGCNGGFPGAAWSYWTRK---GIVSGGPYG----SNQGCRPYEISPCEHHVNGTRPP 203
            .|.. ...|||.||  ||.|::...|   ||||...||    ....|:..|:             
plant   182 DCDRGNDNFGCAGG--GAVWAFEFIKENGGIVSDEVYGYTGEDTAACKAIEM------------- 231

  Fly   204 CAHGGRTPKCSHVCQSGYTVDYAKDKHFGSKSYSVRRNVREIQEEIMTNGPVEGAFTVYEDLILY 268
                 :|.:.  |..:|:.|....|:      .|:::.|......:|.:.         .::..|
plant   232 -----KTTRV--VTINGHEVVPVNDE------MSLKKAVAYQPISVMISA---------ANMSDY 274

  Fly   269 KDGVYQHEHGKELGGHAIRILGWGVWGEEKIPYWLIGNSWNTDWGDHGFFRILR 322
            |.|||:.......|.|.:.|:|:|...:|. .||||.|||..:||:.|:.|:.|
plant   275 KSGVYKGACSNLWGDHNVLIVGYGTSSDEG-DYWLIRNSWGPEWGEGGYLRLQR 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsBNP_572920.1 Propeptide_C1 24..64 CDD:462365
Peptidase_C1A_CathepsinB 88..336 CDD:239111 72/246 (29%)
AT3G43960NP_566867.1 Inhibitor_I29 41..97 CDD:214853
Peptidase_C1 127..346 CDD:425470 73/247 (30%)
Blue background indicates that the domain is not in the aligned region.

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