DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsB and Y71H2AM.25

DIOPT Version :10

Sequence 1:NP_572920.1 Gene:CtsB / 32341 FlyBaseID:FBgn0030521 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001040887.1 Gene:Y71H2AM.25 / 4363054 WormBaseID:WBGene00044760 Length:299 Species:Caenorhabditis elegans


Alignment Length:252 Identity:67/252 - (26%)
Similarity:99/252 - (39%) Gaps:47/252 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 EEFDSRKQWPNCPTIGEIRDQGSCGSCWAFGAVEAMSDRVCIHSGGKVNFHFSADDLVSCCHTCG 153
            |||   ..|.:...:|.::|||.|.:..||....::.......:.|.: ..||...|:. |...|
 Worm    83 EEF---LDWRDKGIVGPVKDQGKCNASHAFAISSSIESMYAKATNGSL-LSFSEQQLID-CDDHG 142

  Fly   154 F-GCNGGFPGAAWSYWTRKGIVSGGPYGSNQGCRPYEISPCEHHVNGTRPPCAHGGRTPKCSHVC 217
            | ||.......|.||:...||.:...|       ||.                 |....||    
 Worm   143 FKGCEEQPAINAVSYFIFHGIETEADY-------PYA-----------------GKENGKC---- 179

  Fly   218 QSGYTVDYAKDKHFGSKSYSVRRNVREIQ-EEIMTN-GPVEGAFTVYEDLILYKDGVYQHEHGKE 280
                |.|..|.|.....:..|..|  |.| :|::|| ||..........|..||.|:|.....:.
 Worm   180 ----TFDSTKSKIQLKDAEFVVSN--ETQGKELVTNYGPAFFTMRAPPSLYDYKIGIYNPSIEEC 238

  Fly   281 LGGHAIR---ILGWGVWGEEKIPYWLIGNSWNTDWGDHGFFRILRGQDHCGIESSIS 334
            ...|.||   |:|:|:.|.:|  ||::..|:.|.||:.|:.::.|..:.|.:...|:
 Worm   239 TSTHEIRSMVIVGYGIEGVQK--YWIVKGSFGTSWGEQGYMKLARDVNACAMADFIT 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsBNP_572920.1 Propeptide_C1 24..64 CDD:462365
Peptidase_C1A_CathepsinB 88..336 CDD:239111 67/252 (27%)
Y71H2AM.25NP_001040887.1 Peptidase_C1A 84..295 CDD:239068 66/251 (26%)
Blue background indicates that the domain is not in the aligned region.

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