DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CtsB and ctsc

DIOPT Version :10

Sequence 1:NP_572920.1 Gene:CtsB / 32341 FlyBaseID:FBgn0030521 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_012812143.2 Gene:ctsc / 407938 XenbaseID:XB-GENE-940480 Length:458 Species:Xenopus tropicalis


Alignment Length:331 Identity:102/331 - (30%)
Similarity:147/331 - (44%) Gaps:69/331 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 EFIEVVRSKAKTWTVGR--NFDASVTEGHIRRLMG------VHPDAHKFALPDKREVLGDLYVNS 83
            :|::.:....|:||...  .::....|..|||..|      :.|  ....||...:..|      
 Frog   169 DFVKQINEVQKSWTATAYPEYEGMTIEDLIRRAGGRNSRIPMRP--RPAPLPTDEKYQG------ 225

  Fly    84 VDELPEEFDSRKQWPNCP---TIGEIRDQGSCGSCWAFGAVEAMSDRVCIHSGGKVNFHFSADDL 145
               ||.|:|    |.|..   .:..:|:|.|||||:||.::..:..|:.|.|........|...:
 Frog   226 ---LPTEWD----WRNIAGYNFVTPVRNQASCGSCYAFSSMGMLESRIQIRSQLSQKPILSPQQV 283

  Fly   146 VSCCHTCGFGCNGGFPG-AAWSYWTRKGIV--SGGPY-GSNQGCRPYEISPCEHHVNGTRPPCAH 206
            |||.: ...||.||||. .|..|.:..|||  |..|| ||:        |||             
 Frog   284 VSCSN-YSQGCEGGFPYLIAGKYVSDYGIVEESDLPYTGSD--------SPC------------- 326

  Fly   207 GGRTPKCSHVCQSGYTVDYAKDKHFGSKSYSVRRNVREIQEEIMTNGPVEGAFTVYEDLILYKDG 271
               |.|.|.  |..||.:|    |:....|. ..|...::.|::..||:..||.||:|.:.|:.|
 Frog   327 ---TLKDSQ--QKYYTAEY----HYVGGFYG-GCNEAYMKLELVLGGPLSVAFEVYDDFMHYRSG 381

  Fly   272 VYQHE------HGKELGGHAIRILGWGVWGEEKIPYWLIGNSWNTDWGDHGFFRILRGQDHCGIE 330
            ||.|.      :..:|..||:.::|:|...:....||::.|||...||:.|:|||.||.|.|.||
 Frog   382 VYHHTGLQDKFNPFQLTNHAVLLVGYGTDQQTGEKYWIVKNSWGESWGEKGYFRIRRGTDECAIE 446

  Fly   331 S-SISA 335
            | ::||
 Frog   447 SIAVSA 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsBNP_572920.1 Propeptide_C1 24..64 CDD:462365 10/44 (23%)
Peptidase_C1A_CathepsinB 88..336 CDD:239111 88/262 (34%)
ctscXP_012812143.2 CathepsinC_exc 20..136 CDD:462598
Peptidase_C1A_CathepsinC 226..455 CDD:239112 89/263 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.