DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsB and Tinag

DIOPT Version :10

Sequence 1:NP_572920.1 Gene:CtsB / 32341 FlyBaseID:FBgn0030521 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001005549.1 Gene:Tinag / 300846 RGDID:1359482 Length:475 Species:Rattus norvegicus


Alignment Length:340 Identity:100/340 - (29%)
Similarity:153/340 - (45%) Gaps:47/340 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLSDEFIEVVRSKAKTWTVGRNFD----ASVTEGHIRRLMGVHPDAHKFALPDKREVLGDLYVNS 83
            |:..|.|:.:......|| .:|:.    .::.||...||..:.|.....::.:    :...|..:
  Rat   155 LVLPELIDHINKGDYGWT-AQNYSQFWGMTLEEGFKFRLGTLPPSPMLLSMNE----MTASYPRA 214

  Fly    84 VDELPEEFDSRKQWPNCPTIGEIRDQGSCGSCWAFGAVEAMSDRVCIHSGGKVNFHFSADDLVSC 148
              :|||.|.:..:||.. |.|.: ||.:|.:.|||......:||:.|.|.|:...:.|..:|:||
  Rat   215 --DLPEVFIASYKWPGW-THGPL-DQKNCAASWAFSTASVAADRIAIQSKGRYTANLSPQNLISC 275

  Fly   149 CHTCGFGCNGGFPGAAWSYWTRKGIVSGGPY-------GSNQGCRPYEISPCEHHVNGTRPPCAH 206
            |.....|||.|....||.:..::|:||...|       .:|..|.....|......:.|| ||.:
  Rat   276 CAKNRHGCNSGSIDRAWWFLRKRGLVSHACYPLFKEQSTNNNSCAMASRSDGRGKRHATR-PCPN 339

  Fly   207 GGRTPKCSHVCQSGYTVDYAKDKHFGSKSYSVRRNVREIQEEIMTNGPVEGAFTVYEDLILYKDG 271
            ........:.|               |..|.:..|..||..||:.||||:....|:||...||.|
  Rat   340 SFEKSNRIYQC---------------SPPYRISSNETEIMREIIQNGPVQAIMQVHEDFFYYKTG 389

  Fly   272 VYQH--------EHGKELGGHAIRILGWG-VWGEE--KIPYWLIGNSWNTDWGDHGFFRILRGQD 325
            :|:|        |..::|..||:::.||| :.|.:  |..:|:..|||...||::|:||||||.:
  Rat   390 IYRHVVSTNEEPEKYRKLRTHAVKLTGWGTLRGAQGKKEKFWIAANSWGKSWGENGYFRILRGVN 454

  Fly   326 HCGIESSISAGLPKL 340
            ...||..|.|...:|
  Rat   455 ESDIEKLIIAAWGQL 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsBNP_572920.1 Propeptide_C1 24..64 CDD:462365 10/43 (23%)
Peptidase_C1A_CathepsinB 88..336 CDD:239111 85/265 (32%)
TinagNP_001005549.1 Somatomedin_B 61..104 CDD:470596
Peptidase_C1A_CathepsinB 217..465 CDD:239111 85/265 (32%)
Blue background indicates that the domain is not in the aligned region.

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