DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CtsB and LOC100333521

DIOPT Version :10

Sequence 1:NP_572920.1 Gene:CtsB / 32341 FlyBaseID:FBgn0030521 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_002661007.3 Gene:LOC100333521 / 100333521 -ID:- Length:302 Species:Danio rerio


Alignment Length:277 Identity:82/277 - (29%)
Similarity:118/277 - (42%) Gaps:48/277 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 YVNSVDELPEEFDSRKQWPNCP---TIGEIRDQ---GSCGSCWAFGAVEAMSDRVCI-HSGGKVN 137
            |:| |.:||..:|    |.|..   .:...|:|   ..||||||.|:..|::||:.| ..|...:
Zfish    53 YLN-VSDLPASWD----WRNIDGKNYVSITRNQHIPQYCGSCWAMGSTSALADRINIKRKGAWPS 112

  Fly   138 FHFSADDLVSCCHTCGFGCNGGFPGAAWSYWTRKGI---VSGGPYGSNQGCRPYEISPCEHHVNG 199
            .:.|..:::. |...| .|.||.....::|....||   ........||.|.|:  :.|     |
Zfish   113 AYLSVQNVID-CGKAG-SCFGGDHLGVYAYANEHGIPDETCNNYQARNQKCDPF--NQC-----G 168

  Fly   200 TRPPCAHGGRTPKCSHVCQSGYTVDYAKDKHFGSKSYSVRRNVREIQEEIMTNGPVEGAFTVYED 264
            |   |:..|   .||.:  ..|||....|  :|..|...|     ::.||..|||:..|....:.
Zfish   169 T---CSFFG---SCSII--KNYTVWKVGD--YGDISGRDR-----MKAEIFKNGPISCAIMATKG 218

  Fly   265 LILYKDGVYQHEHGKELGGHAIRILGWGVWGEEKIPYWLIGNSWNTDWGDHGFFRILRGQDHCG- 328
            |..|..||:...|...:..|.|.:.|||| .|:...||::.|||...||:.|:.||:......| 
Zfish   219 LEAYDGGVFAEFHILSIPNHIISVAGWGV-TEDGTEYWIVRNSWGEFWGESGWARIVTSAYKGGK 282

  Fly   329 -------IESSISAGLP 338
                   ||:..:.|.|
Zfish   283 GNWYNVAIENDCAYGDP 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsBNP_572920.1 Propeptide_C1 24..64 CDD:462365
Peptidase_C1A_CathepsinB 88..336 CDD:239111 76/265 (29%)
LOC100333521XP_002661007.3 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.