DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Neto and neto1

DIOPT Version :10

Sequence 1:NP_001285211.1 Gene:Neto / 32303 FlyBaseID:FBgn0265416 Length:822 Species:Drosophila melanogaster
Sequence 2:XP_002940520.1 Gene:neto1 / 100492295 XenbaseID:XB-GENE-1013796 Length:529 Species:Xenopus tropicalis


Alignment Length:513 Identity:151/513 - (29%)
Similarity:231/513 - (45%) Gaps:81/513 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 LTISRPPRAGRSERQAEEDQVD-RCRLFVEGDPTKNE----LYSPEYPNLYPKNINCTRVITAPK 175
            |.:|...:.|..::...|.|.. .|     |..||:.    ..||.|||.||.:..|..:|.|..
 Frog    17 LHVSWATKTGEDKQTTTEGQKPVEC-----GSWTKHSNGGTFTSPNYPNKYPPDRECIYIIEAAP 76

  Fly   176 GQIIRLDFRNSFNIEAKEGCKFDFLEIRDGQYGFSTLIGKFCGTDFPPEITSKERYLWLHFHSDE 240
            .|.|.|.|..:::||:...||||.:|:|||.:|||.:||::||...||.|.|..|:||:.|.:|.
 Frog    77 RQCIELHFDENYSIESSWECKFDHIEVRDGPFGFSPIIGRYCGQQSPPFIKSSGRFLWIKFFADG 141

  Fly   241 TIEYTGFSAVYEYLDRSRDAPSTDLN-------CTIDKGGFEGFINSTDVPAEIWEQVNRNKIAL 298
            .::..||||.|.:   :.|....||.       |..:.||.||.|.|..:..|.....|.   |:
 Frog   142 ELQSLGFSAQYNF---TPDPDFKDLGILKPLPVCEFEMGGPEGIIESMQIVKEGKASANE---AV 200

  Fly   299 DCIWRIQVKENWKIFLKFLDFKLSKPNDCQTNFLDIFP-EQTVMPLRVKNFCGSAGESITAESNI 362
            ||.|.|:.....||:|:|||:::...|:|:.||:.::. ..:|..||.| ||.:....:...:.:
 Frog   201 DCKWYIRAPPRSKIYLRFLDYEMQNSNECKRNFVAVYDGSSSVEDLRAK-FCSTVANDVMLSTGL 264

  Fly   363 LHLRFYADQTAINSTFGILFTAFRERGAACTEDEYDCEDATCISKDLKCNNLDNCKFRWDEEGC- 426
            ..:|.:||:.:..|.|.:|||:|:|  ..|..:.:.|....||:..|.||.:.||.:.|||..| 
 Frog   265 GVIRMWADEGSRTSRFQMLFTSFQE--PPCEANSFFCHSNMCINNTLVCNGIQNCVYPWDENHCK 327

  Fly   427 --------------TSEAAGQSEHVVIIVIVFGLILGGMVITFIVNCIRKIIR-----DQKIIRE 472
                          :....|.|..:|||:|:..      ||..|....:|.::     ||.:.:|
 Frog   328 EKRKSNLLDQLTNTSGTVIGVSSCIVIILIIIS------VIVQIKQPRKKFVQRKTDFDQTVFQE 386

  Fly   473 HIRESKESKL----------------DEMGRNSK-GRSRENISRQKH--SQTSLQILDDVSNRYY 518
             :.|....:|                |:.....| .||........|  ||.| .|....||...
 Frog   387 -VFEPPHYELCTLRGTEPTADLADVADDFENYHKLRRSSSKCIHDHHCGSQIS-SIKGSRSNLSM 449

  Fly   519 REAVPLS-SQSSKADFKEKEHSILRRHA---DMTQTSLCGVGE-DDGESSSTTTATHE 571
            |:|..|| :||.......:.:.::.:|:   |...|  |.:.| :|..::|...:.||
 Frog   450 RDASLLSETQSQPVKPLNRRNILVMKHSYSQDAADT--CDIDEIEDVPTTSHRLSRHE 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetoNP_001285211.1 CUB 151..252 CDD:238001 44/104 (42%)
CUB <298..384 CDD:238001 27/86 (31%)
LDLa 392..426 CDD:238060 12/33 (36%)
neto1XP_002940520.1 CUB 41..154 CDD:238001 49/117 (42%)
CUB <200..286 CDD:238001 27/86 (31%)
LDLa 292..326 CDD:238060 12/33 (36%)

Return to query results.
Submit another query.