DRSC/TRiP Functional Genomics Resources

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Protein Alignment dmrt11E and Dmrta2

DIOPT Version :8

Sequence 1:NP_511146.2 Gene:dmrt11E / 32291 FlyBaseID:FBgn0030477 Length:377 Species:Drosophila melanogaster
Sequence 2:XP_006238651.1 Gene:Dmrta2 / 313471 RGDID:1308173 Length:536 Species:Rattus norvegicus

Alignment Length:85 Identity:50/86 (58%)
Similarity:58/86 (67%) Gaps:13/86 (15%)


  Fly   118 RTPKCARCRNHGVISCVKGHKRLCRWRECCCPNCQLVVDRQRVMAAQVALRRQQTMEALEA---- 178
            |||||||||||||:|.:|||||.|||::|.|..|.|:.:|||||||||||||||..|..||    
  Rat    65 RTPKCARCRNHGVVSALKGHKRYCRWKDCLCAKCTLIAERQRVMAAQVALRRQQAQEENEARELQ 129

  Fly   179 ----TASSTKSTGVTTASAN 194
                ||.     |:..|:||
  Rat   130 LLYGTAE-----GLALAAAN 144

Known Domains:


GeneSequenceDomainRegion External IDIdentity
dmrt11ENP_511146.2 DM 118..164 CDD:279137 33/46 (72%)
Dmrta2XP_006238651.1 DM 65..111 CDD:279137 33/46 (72%)
CUE_DMA_DMRTA2 311..352 CDD:270601
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR12322
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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