DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4332 and Clptm1

DIOPT Version :10

Sequence 1:NP_572861.1 Gene:CG4332 / 32267 FlyBaseID:FBgn0030456 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001099702.1 Gene:Clptm1 / 292696 RGDID:1310959 Length:664 Species:Rattus norvegicus


Alignment Length:504 Identity:178/504 - (35%)
Similarity:267/504 - (52%) Gaps:54/504 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 DQNFEHDFEVDVPLRTRRNGSLYLHVVLALEG---EPLEWRSLRRDGPTVVHTMSLTDYIVPRAE 140
            |..:||..|:|:|...::|||:|:||.....|   :|.: ::|.|...||..:..:..|...|.:
  Rat   143 DGCYEHFAELDIPQSVQQNGSIYIHVYFTKSGFHPDPRQ-KALYRRLATVHMSRMINKYKRRRFQ 206

  Fly   141 AFK--LLGDSEKGAAAAVQEKEKKKASTTG--RPSTHIRSNVYVTLLNDLYSVSQADVPPEMAPL 201
            ..|  |.|::|      ...:..|:|...|  ...:|...|:.:.:::|.....:..|||.:...
  Rat   207 KTKNLLTGETE------ADPEMIKRAEDYGPVEVISHWHPNITINIVDDHTPWVKGSVPPPLDQY 265

  Fly   202 IRVNR-NQQILPILQTDTFNTRLKDLVPVTRNTTEFTFSFHYKPVGVGKLRLMLLMEHATQALLT 265
            ::.:. :....||:..:.:....||..|:..:.........:.|:.:.:.:|     :|.|:..:
  Rat   266 VKFDAVSGDYYPIIYFNDYWNLQKDYYPINESLASLPLRVSFCPLSLWRWQL-----YAAQSTKS 325

  Fly   266 ----IG-----FATKDIDEVKGIFSDTNVYLLCGTIFVSSIHMLFDFLSFKNDVAFWRKKQSYEG 321
                :|     .:.::.|.||....:|:.|||..||.||.:|.:|:||:||||:.||..:||.||
  Rat   326 PWNFLGDELYEQSDEEQDSVKVALLETSPYLLALTIIVSIVHSVFEFLAFKNDIQFWNSRQSLEG 390

  Fly   322 LSSRTTMWRAFSQIVIFFYLLDENTSYLVLVPVGLGTLIELWKCKKIFRLELSFSGLVRRKLEQV 386
            ||.|:..:..|...|:..|:||..|:::|.|.|.:|.||:|||..|:..:.|.            
  Rat   391 LSVRSVFFGVFQSFVVLLYILDNETNFVVQVSVFIGVLIDLWKITKVMDVRLD------------ 443

  Fly   387 DRRNGDQAGV--------KSGQLAEEQKTDQFDRQGMRYLSYLLYPLCICGAVYSLLYQPHRSWY 443
              |....||:        ||..:  |..|..:|....||||::|:||..|.|||||||..|:.||
  Rat   444 --REHRVAGIFPCPTFRDKSTYI--ESSTKVYDDMAFRYLSWILFPLLGCYAVYSLLYLEHKGWY 504

  Fly   444 SWTLNSLVNGVYAFGFLFMLPQLFVNYKLKSVAALPWRAFMYKAFNTFIDDFFAFIITMPTAHRV 508
            ||.|:.|...:..|||:.|.||||:||||||||.||||...|||.||||||.|||:|.||..:|:
  Rat   505 SWVLSMLYGFLLTFGFITMTPQLFINYKLKSVAHLPWRMLTYKALNTFIDDLFAFVIKMPVMYRI 569

  Fly   509 ACLRDDIVFIIYLYQRWLYPVDKSRL-DTGLSISETPDTGNSSSASIAA 556
            .|||||:||.|||||||:|.||.:|: :.|:|..:.....:.:.||.||
  Rat   570 GCLRDDVVFFIYLYQRWIYRVDPTRVNEFGMSGEDVSAAASGAQASTAA 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4332NP_572861.1 CLPTM1 7..436 CDD:461689 109/381 (29%)
Clptm1NP_001099702.1 CLPTM1 57..497 CDD:461689 109/381 (29%)

Return to query results.
Submit another query.