DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4318 and Zif

DIOPT Version :10

Sequence 1:NP_572860.2 Gene:CG4318 / 32266 FlyBaseID:FBgn0030455 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_649657.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster


Alignment Length:334 Identity:77/334 - (23%)
Similarity:118/334 - (35%) Gaps:119/334 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRVCLREMENMLCIFE------------TMPLPGVSLATMISDWCGFPVLPKDPFPKTICQSCAL 58
            |||||.:.|.:..:.|            .:.|.|||.:. ::|        ::..|..||:||.:
  Fly    10 CRVCLAQSERLQRLDEIREEGEESPNEMLIQLLGVSYSN-LND--------REHIPDGICKSCKV 65

  Fly    59 DAQTAYGMDSVQVIEQDEMVVSEMNYEEEGSNDSDVELIEPVDGSQ-----EMETID-------- 110
            :...||......:.:|  |.:.|...|....::|||.:|:..||||     ||..::        
  Fly    66 ELNMAYQFREKALRKQ--MEIEEYCRELGLLDESDVMMIKEEDGSQQQCDEEMYILEETTTGEEE 128

  Fly   111 ----------LTIDSP------GDNVENMCPNSNSNGNGN---------------VSQSSAQKDT 144
                      |.:|:.      ||.:|.:..|.....|.:               .||..|.::.
  Fly   129 HQEEKGHEEYLEVDTSDQQECIGDTIEYLEDNYTIEMNSDQTEIVLESEKQYEETPSQQLALQEA 193

  Fly   145 KKKMLKK-----------------THK----CNICGKY--------------------------- 161
            .|..||.                 |.|    |::||.:                           
  Fly   194 AKASLKARRGRVRRGLNSLTTSDGTEKGGYICDVCGNFYEKRGRMMEHRRRHDGICQYACELCDA 258

  Fly   162 -FMLPAHLKCHMWVHAREKPYKCLQCSQSYAQIRGLRRHERVHSSRPELRSYKCSRCPKIFNRNS 225
             |.:...|:.||:.|...|||||..||:.:.....|:.||.||..   ::.|.|..|.|.|....
  Fly   259 KFQVREQLRKHMYSHTGSKPYKCSFCSRQFFYESVLKSHENVHRG---IKPYVCKVCDKAFAYAH 320

  Fly   226 ALKNHETMH 234
            :|..||.:|
  Fly   321 SLTKHELIH 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4318NP_572860.2 zf-AD 5..77 CDD:462262 20/82 (24%)
C2H2 Zn finger 155..175 CDD:275368 7/47 (15%)
C2H2 Zn finger 183..203 CDD:275368 6/19 (32%)
C2H2 Zn finger 214..234 CDD:275368 7/19 (37%)
ZifNP_649657.1 zf-AD 9..87 CDD:462262 21/87 (24%)
C2H2 Zn finger 225..245 CDD:275368 3/19 (16%)
COG5048 <250..369 CDD:227381 26/83 (31%)
C2H2 Zn finger 253..273 CDD:275368 4/19 (21%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
C2H2 Zn finger 309..329 CDD:275368 7/19 (37%)
C2H2 Zn finger 337..353 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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