DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4404 and madf-4

DIOPT Version :10

Sequence 1:NP_572838.2 Gene:CG4404 / 32241 FlyBaseID:FBgn0030432 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_505565.3 Gene:madf-4 / 179386 WormBaseID:WBGene00011575 Length:329 Species:Caenorhabditis elegans


Alignment Length:338 Identity:58/338 - (17%)
Similarity:108/338 - (31%) Gaps:98/338 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DPV---FNVRFVQFVENQPCLWNYTHPGYSKKEDVQRAWQQVANDI--KDTVRNCRERWRTIRSS 70
            ||:   |.:..:..|:..||::|...|.:...:.....|:.::.:|  .........:|:.:|..
 Worm    12 DPLEDDFTLALIDSVQRNPCVYNRYDPLHKVTDYKHEIWKLISIEIGYDGQPVELERKWKHMRDK 76

  Fly    71 FLRSLKLARTQTGRGKRKYYLSKY--LQFLVPFTKSRSCHKQLPGMVLRKP-----------GQA 122
            ::|..|..:.:....|...:.:.|  :.||.|:.:.|:..:|...:....|           |.:
 Worm    77 YVRLRKQDKQKAPIKKTNKWYNYYHKMSFLDPYVEHRNRKRQKDYLNSNTPDFLDDDTAFLDGLS 141

  Fly   123 ATAQQEDEVVAAEEEAKVSDGEMPLDVQVSEEEHRRNQEQDREQPTACLPLRLHSIKVEHDSSNA 187
            .....:.|.:....:|..:.   |.....|......|..:..:.||         |.:|.|..|.
 Worm   142 VKEMLKPESLLTSNDAGYNS---PHTTSSSSSSGSNNNGRFLDSPT---------IDIEDDKKNL 194

  Fly   188 NQQLERMVSQQSLVSVPAAALGNHLGWSDLTQWFKGHG-SGHH--------------KLTTTTTT 237
            ....::.|:.|                   |:..|.|. |..|              ||.||:|.
 Worm   195 ALIYDKFVANQ-------------------TENEKNHRFSNKHGKDLLFSTTNTLIEKLATTSTA 240

  Fly   238 PTS-------------PPPPPQPATSALSVFTGGPGGGGSQPDADYSFLISLHPYIKEMNGKQNR 289
            |:|             ..||||...:.:.:                     |...:.|.|..|..
 Worm   241 PSSSRKRKPIPVQILPSSPPPQEKNTKIEL---------------------LEDILNEPNEDQVS 284

  Fly   290 KFRQKVVGLIDDI 302
            .|.:.:...::|:
 Worm   285 LFVRSIARTLNDL 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4404NP_572838.2 MADF 17..103 CDD:214738 16/89 (18%)
BESS 267..301 CDD:460758 5/33 (15%)
madf-4NP_505565.3 MADF 22..111 CDD:214738 16/88 (18%)

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