DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4404 and madf-4

DIOPT Version :9

Sequence 1:NP_572838.2 Gene:CG4404 / 32241 FlyBaseID:FBgn0030432 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_505565.3 Gene:madf-4 / 179386 WormBaseID:WBGene00011575 Length:329 Species:Caenorhabditis elegans


Alignment Length:338 Identity:58/338 - (17%)
Similarity:108/338 - (31%) Gaps:98/338 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DPV---FNVRFVQFVENQPCLWNYTHPGYSKKEDVQRAWQQVANDI--KDTVRNCRERWRTIRSS 70
            ||:   |.:..:..|:..||::|...|.:...:.....|:.::.:|  .........:|:.:|..
 Worm    12 DPLEDDFTLALIDSVQRNPCVYNRYDPLHKVTDYKHEIWKLISIEIGYDGQPVELERKWKHMRDK 76

  Fly    71 FLRSLKLARTQTGRGKRKYYLSKY--LQFLVPFTKSRSCHKQLPGMVLRKP-----------GQA 122
            ::|..|..:.:....|...:.:.|  :.||.|:.:.|:..:|...:....|           |.:
 Worm    77 YVRLRKQDKQKAPIKKTNKWYNYYHKMSFLDPYVEHRNRKRQKDYLNSNTPDFLDDDTAFLDGLS 141

  Fly   123 ATAQQEDEVVAAEEEAKVSDGEMPLDVQVSEEEHRRNQEQDREQPTACLPLRLHSIKVEHDSSNA 187
            .....:.|.:....:|..:.   |.....|......|..:..:.||         |.:|.|..|.
 Worm   142 VKEMLKPESLLTSNDAGYNS---PHTTSSSSSSGSNNNGRFLDSPT---------IDIEDDKKNL 194

  Fly   188 NQQLERMVSQQSLVSVPAAALGNHLGWSDLTQWFKGHG-SGHH--------------KLTTTTTT 237
            ....::.|:.|                   |:..|.|. |..|              ||.||:|.
 Worm   195 ALIYDKFVANQ-------------------TENEKNHRFSNKHGKDLLFSTTNTLIEKLATTSTA 240

  Fly   238 PTS-------------PPPPPQPATSALSVFTGGPGGGGSQPDADYSFLISLHPYIKEMNGKQNR 289
            |:|             ..||||...:.:.:                     |...:.|.|..|..
 Worm   241 PSSSRKRKPIPVQILPSSPPPQEKNTKIEL---------------------LEDILNEPNEDQVS 284

  Fly   290 KFRQKVVGLIDDI 302
            .|.:.:...::|:
 Worm   285 LFVRSIARTLNDL 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4404NP_572838.2 MADF 17..103 CDD:214738 16/89 (18%)
BESS 267..301 CDD:281011 5/33 (15%)
madf-4NP_505565.3 MADF 22..111 CDD:214738 16/88 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001895
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12243
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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