DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4404 and LOC110439798

DIOPT Version :10

Sequence 1:NP_572838.2 Gene:CG4404 / 32241 FlyBaseID:FBgn0030432 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_021332043.1 Gene:LOC110439798 / 110439798 -ID:- Length:250 Species:Danio rerio


Alignment Length:314 Identity:69/314 - (21%)
Similarity:106/314 - (33%) Gaps:118/314 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 RFVQFVENQPCLWNYTHPGYSKKEDVQRAWQQVANDIKDTVRNCRERWRTIRSSFLRSLKLARTQ 81
            :.:|.|...|.|:|.:...|...|...:||::||..:..:|..|:.||:|||..::|..:|.:.:
Zfish     8 KLIQTVYAFPVLYNVSLHDYRSTERRVKAWREVAASVGLSVVECKRRWKTIRDRYIRERRLCKLK 72

  Fly    82 TGRGKRKYYL---SKYLQFLVPFTKSRSCHKQLPGMVLRKPGQA------------ATAQQEDEV 131
            ...|.|:.:.   .:.|.||....:.|           |:|..|            :.|.|||:.
Zfish    73 KDLGGRRLHYWPHRESLAFLDAHIRKR-----------RRPSGAQGPEEEQQEEHSSAALQEDKE 126

  Fly   132 VAAEEEAKVSDGE--------MPLDV--------QVSEEEHRRNQEQDREQPTACLPLRLHS--- 177
            ...:||. |||..        :||.:        |||                   ||.|.|   
Zfish   127 ECVQEEC-VSDSSRFVSPLNPLPLSIVTQLKPVPQVS-------------------PLLLTSLPP 171

  Fly   178 -IKVEHDSSNANQQLERMVSQQSLVSVPAAALGNHLGWSDLTQWFKGHGSGHHKLTTTTTTPTSP 241
             :||...||:|...|            ||:|....|                          ..|
Zfish   172 GLKVAPASSSAPPLL------------PASASAGPL--------------------------NVP 198

  Fly   242 PPPPQPATSALSVFTGGPGGGGSQPDADYSFLISLHPYIKEMNGKQNRKFRQKV 295
            ....|.|..||              |.|..||:|..|.:|.:..::....:.::
Zfish   199 LEEQQRADGAL--------------DEDQLFLLSYVPALKRLTPQKRAAVKMQI 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4404NP_572838.2 MADF 17..103 CDD:214738 25/88 (28%)
BESS 267..301 CDD:460758 7/29 (24%)
LOC110439798XP_021332043.1 MADF 8..97 CDD:214738 25/88 (28%)
BESS 210..244 CDD:460758 7/29 (24%)

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