DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: HOXC8 and zen2

Sequence 1:NP_073149.1 Gene:HOXC8 HGNCID:5129 Length:242 Species:Homo sapiens
Sequence 2:NP_476794.1 Gene:zen2 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster

Alignment Length:118 Identity:49/119 (41%)
Similarity:66/119 (55%) Gaps:12/119 (10%)


Human   130 NQNSSPSLMFPWMR------PHAPGRRS-----GRQTYSRYQTLELEKEFLFNPYLTRKRRIEVS 183
            |.:.|..:|:|.:.      |.|..|.|     .|..:|..|.:|||:||..|.||.|.||||:|
  Fly    13 NYSVSDLMMYPCVELNVEAAPTATTRSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEIS 77

Human   184 HALGLTERQVKIWFQNRRMKWKKENNKDKLPGARDEE-KVEEEGNEEEEKEEE 235
            ..|.||||||||||||||||.||..|:....||.... .:..:.:|:.:|:::
  Fly    78 QRLALTERQVKIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSSEDLQKDDQ 130

Known Domains:


GeneSequenceDomainRegion External IDIdentity
HOXC8NP_073149.1 Antp-type hexapeptide 138..143 2/5 (40%)
Homeobox 153..205 CDD:306543 34/52 (65%)
zen2NP_476794.1 Homeobox 46..99 CDD:278475 34/53 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.