DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pira and Senp3

DIOPT Version :10

Sequence 1:NP_572827.1 Gene:pira / 32229 FlyBaseID:FBgn0030420 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001013134.2 Gene:Senp3 / 303245 RGDID:1312040 Length:568 Species:Rattus norvegicus


Alignment Length:392 Identity:84/392 - (21%)
Similarity:151/392 - (38%) Gaps:114/392 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 MTSNGLRGVQPAEDAPAISQ----WIQSR----NNAAVSKKSEETAGG-------------SQSR 290
            |..:|:||..|....|.:.:    |....    ::..:|.......||             ..|.
  Rat   198 MAEDGMRGSPPVPSGPPMEEDGLRWTPKSPLDPDSGLLSCTLPNGFGGLSGPEGERSLAPPDASI 262

  Fly   291 VQSNVASISSPAVK--------ATSDAAIPTPAERA-ERSRLRRNRNWILSRDVDE-----DAVV 341
            :.|||.||.....:        .|::.| ..|.|:| :.|.||......:...:||     .:::
  Rat   263 LISNVCSIGDHVAQELFQSSDLGTAEEA-DRPGEKAGQHSPLREEHVTCVQSILDEFLQTYGSLI 326

  Fly   342 LVSSGDEETTAADDGQTERRLSPDEN----QTLFTYPPTGTGGL-----------SITIKDFMCL 391
            .:|: ||.....:|...:...:|...    |.:.:|.......:           .:|:.|...|
  Rat   327 PLST-DEVVEKLEDIFQQEFSTPSRKSLVLQLIQSYQRMPGNAMVRGFRVSYKRHVLTMDDLGTL 390

  Fly   392 SKGSYLNDIIIDFYLRWLKNNIIPEEQRDRTHIFSTFFHKRLTTRTNPRNTKQTAAQKRHERVEK 456
            ...::|||.:::.|     .:::.:...::.|.|::||:.:|.|             |.::.|::
  Rat   391 YGQNWLNDQVMNMY-----GDLVMDTVPEKVHFFNSFFYDKLRT-------------KGYDGVKR 437

  Fly   457 WTRNVNIFDKDFIIIPFNEQSHWILAIICYPNLRSPVVNNNNVQTTLSDDIPIKQPLILIFDSLA 521
            ||:||:||:|:.::||.:.:.||.|.                       .:.:::..|..|||..
  Rat   438 WTKNVDIFNKELLLIPIHLEVHWSLV-----------------------SVDVRRRTITYFDSQR 479

  Fly   522 VTSRHRAIAILRDYLTC-EHKAKYPNALAHVFNKDNMPGH-------SVEVPQQQNLTDCGLYLL 578
            ..:|.           | :|.|||..|.|  ..||.:..|       .:.|.:|.|.:|||.::|
  Rat   480 TLNRR-----------CPKHIAKYLQAEA--VKKDRLDFHQGWKGYFKMNVARQNNDSDCGAFVL 531

  Fly   579 QY 580
            ||
  Rat   532 QY 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
piraNP_572827.1 Peptidase_C48 396..585 CDD:420019 48/193 (25%)
Senp3NP_001013134.2 SENP3_5_N <284..382 CDD:466160 17/99 (17%)
Peptidase_C48 394..566 CDD:397169 48/194 (25%)

Return to query results.
Submit another query.