DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2540 and F22F7.7

DIOPT Version :10

Sequence 1:NP_572818.1 Gene:CG2540 / 32216 FlyBaseID:FBgn0030411 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_503578.1 Gene:F22F7.7 / 178693 WormBaseID:WBGene00017724 Length:232 Species:Caenorhabditis elegans


Alignment Length:187 Identity:65/187 - (34%)
Similarity:98/187 - (52%) Gaps:19/187 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 AATDADVWIFGYGSLVWKTDFPYIDRRRGFVWGFKRRFYQHSIDHRGIPERPGRVVTLLPGDPAQ 132
            ::|...:||||||||:|...|.:...|:.:..|:.||.||.:..|||..:.||||.||:  :...
 Worm    44 SSTSQSLWIFGYGSLIWNPGFTFSTSRKAYAIGWARRMYQGNTYHRGDEKLPGRVATLI--EETN 106

  Fly   133 DRVYGVAYRI-AASQKGAVLDHLDYRE-KNGYE------RCSLEFHEYPTDGAEPIQVIMYVATQ 189
            ....||.:|: ..|.....:.:|:.|| .|||.      :.....|..||    .:..:..||.|
 Worm   107 SYTNGVVFRVDGKSAIATAVKYLEQRECDNGYAFRMVPVQIRSAAHRRPT----VVMALTCVADQ 167

  Fly   190 ANDSYAG--DVWQVPCIARQIFSSAGPSGPNREYLFNLAAAMDQLFPGAVDEHLEEL 244
            .|:.|.|  |:.:   :||:|.::.|.:|||.||:.|||..:.:|||...|:||.:|
 Worm   168 QNELYLGPDDLIK---MAREIVTAKGCAGPNCEYVLNLAENLRKLFPNDEDDHLFQL 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2540NP_572818.1 ChaC 74..251 CDD:398428 64/181 (35%)
F22F7.7NP_503578.1 ChaC 50..228 CDD:398428 64/181 (35%)

Return to query results.
Submit another query.