DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and Nkx1-1

DIOPT Version :10

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_035450.1 Gene:Nkx1-1 / 672284 MGIID:109346 Length:440 Species:Mus musculus


Alignment Length:247 Identity:90/247 - (36%)
Similarity:109/247 - (44%) Gaps:53/247 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 GTGSGGGGGGGGGGGVASGLSAAAAAAGVAAGLLAAAASGANGDRDANGG-----SGPGSGGGTS 143
            ||....||.||.|   |.|.....||...|:.:...||.|..|:.....|     :|.||.|.|.
Mouse   204 GTEEPRGGSGGLG---ARGSGCPGAAEVEASPVDDTAAPGPRGNSPGAPGPPATATGAGSAGSTP 265

  Fly   144 GGYA-------EHKLQLSKSGRKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSE 201
            .|.|       :.....|||| ||||.|||||:.||..||.||:..:||||.:|.::|.:|:|:|
Mouse   266 QGAAVTTKPKRKRTGSDSKSG-KPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTE 329

  Fly   202 TQVKTWYQNRRTKWKRQNQLRLEQLRHQATMEKDFVVQDGGGAG-------GLGCCPSGLSS-SF 258
            ||||.|:||||||||:||.            ..|.....|||.|       |.| .|.|||. |.
Mouse   330 TQVKIWFQNRRTKWKKQNP------------GADTSAPTGGGGGPGPGAGPGAG-LPGGLSPLSP 381

  Fly   259 SAAAAAAAAASNPCN----------------FLTSAAAAAIFRNVGYVHGCP 294
            |....|..|...|..                ||:|.|..:.|......:|.|
Mouse   382 SPPMGAPLALHGPAGYPAHSPGGLVCAAQLPFLSSPAVLSPFVLGSQTYGAP 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 34/55 (62%)
Nkx1-1NP_035450.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..82
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..291 31/90 (34%)
Homeodomain 289..345 CDD:459649 34/55 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 342..387 18/57 (32%)
Blue background indicates that the domain is not in the aligned region.

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