DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and vox

DIOPT Version :10

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_571773.1 Gene:vox / 64807 ZFINID:ZDB-GENE-010108-1 Length:242 Species:Danio rerio


Alignment Length:143 Identity:46/143 - (32%)
Similarity:64/143 - (44%) Gaps:34/143 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 GVASGLSAAAAAAGVAAGLLAAAASGANGDRDANGGSGPGSGGGTSGGYAEHKLQLSKSGRKPRR 162
            |.:||..:.|||:.     .|:...|.:.::|          |.|                  ||
Zfish    88 GYSSGYESEAAASE-----CASVEDGHDAEKD----------GAT------------------RR 119

  Fly   163 RRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQ-NQLRLEQL 226
            .||.||..|:..||:.|...|||...:|...|..|.|||||::||:||||.|.||: .::|.:.|
Zfish   120 IRTKFTPEQIDKLEKIFNKHKYLDAGERVKTALKLGLSETQIRTWFQNRRMKLKREVQEMRADFL 184

  Fly   227 RHQATMEKDFVVQ 239
            ..|..:.....||
Zfish   185 LPQMVLPPVIPVQ 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 28/55 (51%)
voxNP_571773.1 Homeodomain 118..174 CDD:459649 28/55 (51%)

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