Protein Alignment CG11085 and hoxc11b

DIOPT Version :10

• Sequence 1: NP_572815.3
• Gene: CG11085 / 32213
• FlyBaseID: FBgn0030408
• Length: 295
• Species: Drosophila melanogaster
• Sequence 2: XP_009298848.2
• Gene: hoxc11b / 570925
• ZFINID: ZDB-GENE-000822-3
• Length: 306
• Species: Danio rerio
• Alignment Length: 218
• Identity: 56/218 - (25%)
• Similarity: 93/218 - (42%)
• Gaps: 43/218 - (19%)

  Fly    32 DSDIDIEDRSTPDSTAAG--CQQELLLSHHHRRFTHHDESSVESCLSATRGPGSGTGS------- 87
            :.|:...|...|.:|...  .:.|.:.:|||    :|         .|...||:|..|
Zfish    97 EEDLVHRDCLPPSATMTEMLMKNENVYNHHH----YH---------PAINHPGTGFYSSIGKTNV 148

  Fly    88 -------------GGGGGGGGGGGVASGLSAAAAAAGVAAGLLAAAASGANGDRDANGGSGPGSG 139
                         .|..||..|..:..|.|....:|...:.:|.:.|.|.. :.:....:..||.
Zfish   149 LPQSFDRFLDCAHSGADGGSEGNCLQKGSSGKPESASQVSSVLRSTADGEK-ELECEKNTTSGSF 212

  Fly   140 GGTSGGYAEHKLQLSKSGR----KPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLS 200
            ..:||...:::   :|||.    :.|::|..:|..|:..|||:|....|::...|..::..|||:
Zfish   213 ETSSGTKNDNQ---TKSGHSTTPRMRKKRCPYTKFQIRELEREFFFNVYINKEKRLQLSRILNLT 274

  Fly   201 ETQVKTWYQNRRTKWKRQNQLRL 223
            :.|||.|:||||.|.|:.::.||
Zfish   275 DRQVKIWFQNRRMKEKKLSRDRL 297

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11085	NP_572815.3	Homeodomain	161..217	CDD:459649	22/55 (40%)
hoxc11b	XP_009298848.2	None