DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and lbx1a

DIOPT Version :10

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001020703.1 Gene:lbx1a / 564103 ZFINID:ZDB-GENE-040724-40 Length:269 Species:Danio rerio


Alignment Length:70 Identity:35/70 - (50%)
Similarity:48/70 - (68%) Gaps:4/70 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 RKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQLR 222
            :|.|:.|||||:.|:..||::|..|||||.|||..:|:.|.|:..||.||:||||.|.||.    
Zfish   123 KKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRD---- 183

  Fly   223 LEQLR 227
            ||:::
Zfish   184 LEEMK 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 30/55 (55%)
lbx1aNP_001020703.1 Homeodomain 126..182 CDD:459649 30/55 (55%)

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