Protein Alignment CG11085 and barhl1a

DIOPT Version :10

• Sequence 1: NP_572815.3
• Gene: CG11085 / 32213
• FlyBaseID: FBgn0030408
• Length: 295
• Species: Drosophila melanogaster
• Sequence 2: NP_001017712.3
• Gene: barhl1a / 550407
• ZFINID: ZDB-GENE-050417-212
• Length: 299
• Species: Danio rerio
• Alignment Length: 262
• Identity: 79/262 - (30%)
• Similarity: 109/262 - (41%)
• Gaps: 79/262 - (30%)

  Fly     1 MQSSKSFLIRDLL-----GDLINRRQTDSELELSNDDSDID-------------IEDRSTPDSTA 47
            :.:..||.|..:|     ...:::.:..|..||| ..||:|             :||.....:.|
Zfish     3 VSNGSSFGIESILSHRASSPCMSKGECRSPAELS-PRSDLDSGCSSPPSPRRSSVEDAVHRRARA 66

  Fly    48 AGCQQELLLSHHHRRFTHH--------DESSVESCLSATRGPGSGTGSGGGGGGGGGGGVASGLS 104
            .|....|.:|...|..|..        |...:.:|     .|.|.||.
Zfish    67 LGLDSPLQISQQPRTVTSSFLIRDILADCKPLAAC-----APYSSTGQ----------------- 109

  Fly   105 AAAAAAGVAAGLLAAAASGANGDRDANGGSGPGSGGGTSGGY-----AEHKLQLSKSG-----RK 159
                :|..|...:....|.::.|.:                |     |:.::..|:..     :|
Zfish   110 ----SAQDAEDCMDKLHSNSSSDSE----------------YRVKDEADREISSSRDSPNSRLKK 154

  Fly   160 PRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQLRLE 224
            ||:.|||||..|||.|||.|..||||||.||.::|.:|||::|||||||||||||||||..:.||
Zfish   155 PRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQTAVGLE 219

  Fly   225 QL 226
            .|
Zfish   220 LL 221

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11085	NP_572815.3	Homeodomain	161..217	CDD:459649	39/55 (71%)
barhl1a	NP_001017712.3	None