DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and Dbx2

DIOPT Version :10

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001418946.1 Gene:Dbx2 / 541457 RGDID:1359605 Length:377 Species:Rattus norvegicus


Alignment Length:131 Identity:46/131 - (35%)
Similarity:67/131 - (51%) Gaps:15/131 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 GGSGPGSGGGTSGGYAEHKLQL--SKSGRKPRR---RRTAFTHAQLAYLERKFRCQKYLSVADRS 191
            |||.......|:....||.|.|  ..|..|.||   ||..|:..|...||:.|:.|||:|..||.
  Rat   193 GGSCRRPASPTAFSREEHGLPLLTQDSNSKARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRR 257

  Fly   192 DVAETLNLSETQVKTWYQNRRTKWK--RQNQLRLEQLRHQATMEKDFVVQDGGGAGGLGC---CP 251
            .:|.:|.|.|:|||.|:||||.||:  ::.::...:...:.::::|.:.|...     ||   ||
  Rat   258 KLAISLGLKESQVKIWFQNRRMKWRNSKEKEVLSNRCLQEVSLQEDRLAQPAA-----GCPPQCP 317

  Fly   252 S 252
            |
  Rat   318 S 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 29/60 (48%)
Dbx2NP_001418946.1 PHA03247 <39..186 CDD:223021
Homeodomain 229..283 CDD:459649 27/53 (51%)
Blue background indicates that the domain is not in the aligned region.

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