DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and PAX4

DIOPT Version :9

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001353039.1 Gene:PAX4 / 5078 HGNCID:8618 Length:351 Species:Homo sapiens


Alignment Length:155 Identity:40/155 - (25%)
Similarity:63/155 - (40%) Gaps:37/155 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 LLAAAASGANGDRDANGGSGPGSGGGTSGGYAEHKLQLSKSGRKPRRRRTAFTHAQLAYLERKFR 180
            :||.|....:...:...|:.||:|                     .|.||.|:.:|...||::|:
Human   147 VLAPAVLTPHSGSETPRGTHPGTG---------------------HRNRTIFSPSQAEALEKEFQ 190

  Fly   181 CQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQLRLEQLRHQATMEKDFVVQDGGGAG 245
            ..:|.....|..:|...:|.|..|:.|:.|||.||:||.:|:.|             :|..|.:.
Human   191 RGQYPDSVARGKLATATSLPEDTVRVWFSNRRAKWRRQEKLKWE-------------MQLPGASQ 242

  Fly   246 GL---GCCPSGLSSSFSAAAAAAAA 267
            ||   ...|..:|:..|..:...||
Human   243 GLTVPRVAPGIISAQQSPGSVPTAA 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeobox 163..216 CDD:278475 18/52 (35%)
PAX4NP_001353039.1 PAX 5..129 CDD:128645
Homeobox 174..226 CDD:306543 18/51 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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