DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and Lbx1

DIOPT Version :10

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001040573.1 Gene:Lbx1 / 499362 RGDID:1564197 Length:285 Species:Rattus norvegicus


Alignment Length:231 Identity:67/231 - (29%)
Similarity:92/231 - (39%) Gaps:78/231 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 AAGLLAAAASGANGDRDANGG-----------------------------------SGPGSGGGT 142
            ||.|||||      |:.|.||                                   :..|..|.|
  Rat    56 AAHLLAAA------DKHAPGGLPLAGRALLSQTSPLCALEELASKTFKGLEVSVLQAAEGRDGMT 114

  Fly   143 SGGYAEHKLQLSKSGRKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTW 207
            ..|..:       :.:|.|:.|||||:.|:..||::|..|||||.|||..:|:.|.|:..||.||
  Rat   115 IFGQRQ-------TPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITW 172

  Fly   208 YQNRRTKWKRQNQLRLEQLRHQ------------------ATMEKDFVVQDGGGAGGLGCCPSGL 254
            :||||.|.||.    ||:::..                  |.:|::.....|||.||.|.|....
  Rat   173 FQNRRAKLKRD----LEEMKADVESAKKLGPSGQMDIVALAELEQNSEASGGGGGGGGGGCGRAK 233

  Fly   255 SSSFSAAAAAAAAAS--------NPCNFLTSAAAAA 282
            |...|.|....|..:        :|.:.||...|::
  Rat   234 SRPGSPALPPGAPQAPGGGPLQLSPASPLTDQRASS 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 30/55 (55%)
Lbx1NP_001040573.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36
Homeodomain 126..182 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..285 16/58 (28%)
Blue background indicates that the domain is not in the aligned region.

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