Protein Alignment: CG11085 and B-H1

• Sequence 1: NP_572815.3
• Gene: CG11085
• FlyBaseID: FBgn0030408
• Length: 295
• Species: Drosophila melanogaster
• Sequence 2: NP_523387.1
• Gene: B-H1
• FlyBaseID: FBgn0011758
• Length: 544
• Species: Drosophila melanogaster
• Alignment Length: 362
• Identity: 109/363 (30%)
• Similarity: 150/363 (41%)
• Gaps: 93/363 (26%)

  Fly     7 FLIRDLLGD-----LINRRQTDSELELSNDDSDIDIEDRSTP---------------DSTAAGCQ 51
            |:|.|:|..     ...::|...:|...|::::......|:|               .|..||..
  Fly    77 FMINDILAGSAAAAFYKQQQHHQQLHHHNNNNNSGSSGGSSPAHSNNNNNINGDNCEASNVAGVG 141

  Fly    52 QELLLSHHHRRFTHHDESSVESCLSATRGPGSGTGSGGGGGGGGGGGVAS---------GLSAAA 107
            ......||.:   .|..:...:...|...|....|......||.|..||.         ..:|||
  Fly   142 VLPSALHHPQ---PHPPTHPHTHPHALMHPHGKLGHFPPTAGGNGLNVAQYAAAMQQHYAAAAAA 203

  Fly   108 AAA--GVAAGLLAAAASGANG------DRDANGGSG--PGSGGG--------------TSGGYAE 148
            |||  ..||...||||:.|.|      |...:||.|  |.:||.              .||...:
  Fly   204 AAARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGLAPPAGGDLDDSSDYHEENEDCDSGNMDD 268

  Fly   149 HKL-------------------QLSKSGRKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVA 194
            |.:                   .:|...:|.|:.|||||..||..||:.|..||||||.:|.::|
  Fly   269 HSVCSNGGKDDDGNSVKSGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELA 333

  Fly   195 ETLNLSETQVKTWYQNRRTKWKRQNQLRLEQLRHQ---ATMEKDFVVQDGGGAGGLGCCPSGLSS 256
            ..|:||:.||||||||||||||||..:.||.|...   |..::.:     ||:..||..|
  Fly   334 HKLDLSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNFAAFQRLY-----GGSPYLGAWP----- 388

  Fly   257 SFSAAAAAAAAASNPCN----FLTSAAAAAIFRNVGY 289
             ::|||.||..|:...|    :..:|||||:.:.:.|
  Fly   389 -YAAAAGAAHGATPHTNIDIYYRQAAAAAAMQKPLPY 424

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11085	NP_572815.3	Homeobox	163..216	CDD:278475	34/53 (64%)
B-H1	NP_523387.1	Homeobox	303..355	CDD:278475	34/52 (65%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	1	0.900				E1_KOG0488
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
	1	0.900