DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and hlx1

DIOPT Version :10

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001418073.1 Gene:hlx1 / 327096 ZFINID:ZDB-GENE-030131-5304 Length:357 Species:Danio rerio


Alignment Length:114 Identity:35/114 - (30%)
Similarity:56/114 - (49%) Gaps:16/114 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 GSGGGTSGGYAEHKLQ----------LSKS------GRKPRRRRTAFTHAQLAYLERKFRCQKYL 185
            ||.|..:....:|:.|          |||.      .||....|..|::.|...||::|..|||:
Zfish   170 GSIGNAARQSGQHQFQDTFPGRPYAVLSKDTMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYV 234

  Fly   186 SVADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQLRLEQLRHQATMEK 234
            :..||..:|..|.|::.|||.|:||||.||:...:.:.::.:.:...:|
Zfish   235 TKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKEKEQPDK 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 24/55 (44%)
hlx1NP_001418073.1 Homeodomain 206..266 CDD:459649 26/59 (44%)

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