DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG11085 and Nkx1-1

Sequence 1:NP_572815.3 Gene:CG11085 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:XP_001065657.3 Gene:Nkx1-1 RGDID:1564874 Length:443 Species:Rattus norvegicus

Alignment Length:308 Identity:98/309 (32%)
Similarity:123/309 (40%) Gaps:91/309 (29%)


  Fly    23 DSELELSNDDSDIDIEDRSTPDSTAAGCQQELLLSHHHRRFTHHDESSVESCLSATRGPGSGTGS 87
            |||.|...:|.|   ||::.......|.::.                                  
  Rat   184 DSEDEAPEEDED---EDQAPEVQDVQGTEEP---------------------------------- 211

  Fly    88 GGGGGGGGGGGVASGLSAAAAAAGVAAGLLAAAASGANGDRDANGG-----SGPGSGGGTSGGYA 147
              .||.||.|...||.|.||...  |:.:..|||.|..|:.....|     :|.|:.|.|..|.|
  Rat   212 --RGGSGGLGARGSGCSGAAEVE--ASPVDEAAAPGPRGNSPGAPGPPVTAAGAGNAGSTPQGAA 272

  Fly   148 -------EHKLQLSKSGRKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVK 205
                   :.....|||| ||||.|||||:.||..||.||:..:||||.:|.::|.:|:|:|||||
  Rat   273 VATKPKRKRTGSDSKSG-KPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVK 336

  Fly   206 TWYQNRRTKWKRQNQLRLEQLRHQATMEKDFVVQDGGGAG-------GLGCCPSGLSS-SFSAAA 262
            .|:||||||||:||.            ..|.....|||.|       |.| .|.|||. |.|...
  Rat   337 IWFQNRRTKWKKQNP------------GADTSAPTGGGGGPGPGAGPGAG-LPGGLSPLSPSPPM 388

  Fly   263 AAAAAASNPCN----------------FLTSAAAAAIFRNVGYVHGCP 294
            .|..|...|..                ||:|.|..:.|......:|.|
  Rat   389 GAPLALHGPAGYPAHSPGGLVCAAQLPFLSSPAVLSPFVLGSQTYGAP 436

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeobox 163..216 CDD:278475 32/53 (60%)
Nkx1-1XP_001065657.3 Homeobox 295..347 CDD:278475 32/52 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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