DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11085 and tlx3b

DIOPT Version :9

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_739572.2 Gene:tlx3b / 266965 ZFINID:ZDB-GENE-021021-1 Length:300 Species:Danio rerio


Alignment Length:246 Identity:72/246 - (29%)
Similarity:105/246 - (42%) Gaps:57/246 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 DRSTPDSTAAGCQQELLLSHHHRRFTHHDE----SSVESCLSATRGPG-SGTGSGGGGGGGGGGG 98
            ||: |.|:.:|..|....:.|.......|:    :..||..::||... |.:||....||....|
Zfish     2 DRA-PSSSPSGTSQTSQPTQHEPISFGIDQILSGTDQESQQNSTRNSSESSSGSSSASGGCYHLG 65

  Fly    99 VASGLSAAAAAA------GVAAGLLAAAASGANGDRDANGG--------------------SGPG 137
            ..:|.||.....      |:||....::..|.|... |.||                    :.||
Zfish    66 SPTGASATPYTTLTGTFHGIAAPYEESSPYGMNLTL-APGGVIRVPAHRPLAAAVPPPMASAVPG 129

  Fly   138 SGGGTSGGYAEHKLQLSK--------------------SGRKPRRR---RTAFTHAQLAYLERKF 179
            . |..|..:.|...:.:|                    ..|.|.:|   ||:|:..|:..||::|
Zfish   130 L-GSLSFPWMESSQRFAKDRFAAALTPFTVARRIGHPYQNRTPPKRKKPRTSFSRVQICELEKRF 193

  Fly   180 RCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQLRLEQLRHQA 230
            ..||||:.|:|:.:|:||.:::.|||||:|||||||:||.....|..|.||
Zfish   194 HRQKYLASAERAALAKTLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQA 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 29/58 (50%)
tlx3bNP_739572.2 Homeodomain 175..231 CDD:459649 28/55 (51%)

Return to query results.
Submit another query.