DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and ceh-27

DIOPT Version :10

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001256348.1 Gene:ceh-27 / 185853 WormBaseID:WBGene00000449 Length:263 Species:Caenorhabditis elegans


Alignment Length:134 Identity:46/134 - (34%)
Similarity:64/134 - (47%) Gaps:38/134 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 RRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQLRLEQ 225
            |:||..|:..|:..|||||:..:|||.|||.::|:::|||.||||.|:||:|.|.|||.:     
 Worm    99 RKRRVLFSPQQVHVLERKFQINRYLSAADRENLAKSINLSATQVKIWFQNQRYKCKRQEK----- 158

  Fly   226 LRHQATMEKDFVVQDGG----------------GAGGLGCCPSGLSSS-------FSAAAAAAAA 267
                   ||.   .|||                .:|.||...||:...       |..:|.::..
 Worm   159 -------EKK---MDGGCYRDSDRDTDSDRDNDSSGSLGSSMSGIKKEEDEDRKPFMPSAVSSDT 213

  Fly   268 ASNP 271
            |..|
 Worm   214 ACLP 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 29/55 (53%)
ceh-27NP_001256348.1 Homeodomain 99..155 CDD:459649 29/55 (53%)

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