Protein Alignment CG11085 and Gbx2

DIOPT Version :10

• Sequence 1: NP_572815.3
• Gene: CG11085 / 32213
• FlyBaseID: FBgn0030408
• Length: 295
• Species: Drosophila melanogaster
• Sequence 2: NP_446160.1
• Gene: Gbx2 / 114500
• RGDID: 621866
• Length: 348
• Species: Rattus norvegicus
• Alignment Length: 260
• Identity: 72/260 - (27%)
• Similarity: 90/260 - (34%)
• Gaps: 103/260 - (39%)

  Fly    43 PDSTAAGCQQELLLSHHHRRFTHHDESSVES--CLSATRG-----------PGSGTGS------- 87
            |....|..|..|..:|     .||...|:.:  |.|..:|           ||..:.|
  Rat    63 PALPQAALQPALPPAH-----PHHQIPSLPTGFCSSLAQGMALTSTLMATLPGGFSASPQHQEAA 122

  Fly    88 -----------GGGG------------GGGGGGGVASGLSAAAAAAGVAAGLLAAAAS------- 122
                       |||.            .|.........|.|.:||..|.|.|:.|...
  Rat   123 AARKFAPQPLPGGGNFDKSEALQADTEDGKAFLAKEGSLLAFSAAEAVQASLVGAVRGQGKDESK 187

  Fly   123 ---------------------------GANGDRDANGG--------SGPGSGGGTSGGYAEHKLQ 152
                                       |....::.:.|        ||..:|..||.|
  Rat   188 VEDDPKGKEESFSLESDVDYSSDDNLPGQTAHKEEDPGHALEETPQSGGAAGSTTSTG------- 245

  Fly   153 LSKSGRKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKR 217
                  |.||||||||..||..||::|.|:||||:.:||.:|..|.|||.|||.|:||||.||||
  Rat   246 ------KNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKR 304

  Fly   218  217
              Rat   305  304

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11085	NP_572815.3	Homeodomain	161..217	CDD:459649	35/55 (64%)
Gbx2	NP_446160.1	Homeodomain	248..304	CDD:459649	35/55 (64%)