DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11085 and LBX1

DIOPT Version :10

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_006553.2 Gene:LBX1 / 10660 HGNCID:16960 Length:281 Species:Homo sapiens


Alignment Length:227 Identity:67/227 - (29%)
Similarity:88/227 - (38%) Gaps:74/227 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 AAGLLAAAASGANGDRDANGG-----------------------------------SGPGSGGGT 142
            ||.|||||      |:.|.||                                   :..|..|.|
Human    56 AAHLLAAA------DKHAQGGLPLAGRALLSQTSPLCALEELASKTFKGLEVSVLQAAEGRDGMT 114

  Fly   143 SGGYAEHKLQLSKSGRKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTW 207
            ..|..:       :.:|.|:.|||||:.|:..||::|..|||||.|||..:|:.|.|:..||.||
Human   115 IFGQRQ-------TPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITW 172

  Fly   208 YQNRRTKWKRQNQLRLEQLRHQATMEK--------DFVV---------QDGGGAGGLGCCPSG-- 253
            :||||.|.||.    ||:::......|        |.|.         ...||.||.|...|.  
Human   173 FQNRRAKLKRD----LEEMKADVESAKKLGPSGQMDIVALAELEQNSEATAGGGGGCGRAKSRPG 233

  Fly   254 ---LSSSFSAAAAAAAAASNPCNFLTSAAAAA 282
               |......|..|.|...:|.:.||...|::
Human   234 SPVLPPGAPKAPGAGALQLSPASPLTDQPASS 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 30/55 (55%)
LBX1NP_006553.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..35
Homeodomain 126..182 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..281 14/52 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.