Protein Alignment CG11085 and hoxc12

DIOPT Version :10

• Sequence 1: NP_572815.3
• Gene: CG11085 / 32213
• FlyBaseID: FBgn0030408
• Length: 295
• Species: Drosophila melanogaster
• Sequence 2: XP_002936693.1
• Gene: hoxc12 / 100487557
• XenbaseID: XB-GENE-853677
• Length: 263
• Species: Xenopus tropicalis
• Alignment Length: 162
• Identity: 45/162 - (27%)
• Similarity: 70/162 - (43%)
• Gaps: 43/162 - (26%)

  Fly    63 FTHHDESSVE-------SCLSATRGPGSGTGSGGGGGGGGGGGVASGLSAAAAAAGVAAGLLAAA 120
            |..:|.::|:       ||.|.....||..             :..|...|.:.|       |..
 Frog   127 FQKYDYTAVDSVPHDPPSCQSLESDSGSSL-------------LNEGTKNAVSEA-------ATM 171

  Fly   121 ASGANGDRDANGGSGPGSGGGTSGGYAEHKLQLSKSGRKPRRRRTAFTHAQLAYLERKFRCQKYL 185
            ||.:|     .|.|.|.||   :..|..|        .:.|::|..::..|||.||.:|...:::
 Frog   172 ASPSN-----PGNSLPASG---APWYPIH--------TRSRKKRKPYSKIQLAELEGEFMVNEFI 220

  Fly   186 SVADRSDVAETLNLSETQVKTWYQNRRTKWKR 217
            :...|.::::.|:||:.|||.|:||||.|.||
 Frog   221 TRQRRRELSDRLSLSDQQVKIWFQNRRMKKKR 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11085	NP_572815.3	Homeodomain	161..217	CDD:459649	21/55 (38%)
hoxc12	XP_002936693.1	Homeodomain	196..252	CDD:459649	21/55 (38%)