DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and chn1

DIOPT Version :9

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:XP_012825384.1 Gene:chn1 / 100038142 XenbaseID:XB-GENE-852930 Length:459 Species:Xenopus tropicalis


Alignment Length:61 Identity:15/61 - (24%)
Similarity:22/61 - (36%) Gaps:16/61 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 IEDRSTPDSTA--------------AGCQQELLLSHHHRRFTHHDESSVESC--LSATRGP 81
            :|....||..|              |.|:....|..|.:|.|.|::.::.|.  |....||
 Frog   364 LESAKAPDPDAQLETLHDALKLLPPAHCETLRYLMAHLKRVTLHEKDNLMSAENLGIVFGP 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeobox 163..216 CDD:278475
chn1XP_012825384.1 SH2_a2chimerin_b2chimerin 42..128 CDD:198215
C1_1 206..255 CDD:365894
RhoGAP_chimaerin 266..459 CDD:239837 15/61 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.860

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